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A general framework for the simulation of reaction-diffusion systems with probabilistic cellular automata is presented. The basic reaction probabilities of the chemical model translate directly into the transition rules of the automaton,…

adap-org · Physics 2007-05-23 S. Altmeyer , C. Wilke , T. Martinetz

We propose a Bayesian stochastic cellular automata modeling approach to model the spread of wildfires with uncertainty quantification. The model considers a dynamic neighborhood structure that allows neighbor states to inform transition…

Applications · Statistics 2023-06-07 Nicholas Grieshop , Christopher K. Wikle

This paper is the second part of a series of two papers dealing with bulking: a way to define quasi-order on cellular automata by comparing space-time diagrams up to rescaling. In the present paper, we introduce three notions of simulation…

Formal Languages and Automata Theory · Computer Science 2010-09-27 Marianne Delorme , Jacques Mazoyer , Nicolas Ollinger , Guillaume Theyssier

The emergent dynamics in spacetime diagrams of cellular automata (CAs) is often organised by means of a number of behavioural classes. Whilst classification of elementary CAs is feasible and well-studied, non-elementary CAs are generally…

Cellular Automata and Lattice Gases · Physics 2025-07-10 Michiel Rollier , Aisling J. Daly , Jan M. Baetens

Gravitational clustering of a random distribution of point masses is dominated by the effective short-range interactions due to large-scale isotropy. We introduce a one-dimensional cellular automaton to reproduce this effect in the most…

Condensed Matter · Physics 2009-11-07 Roya Mohayaee , Luciano Pietronero

This paper introduces two mechanisms for computing over-approximations of sets of reachable states, with the aim of ensuring termination of state-space exploration. The first mechanism consists in over-approximating the automata…

Formal Languages and Automata Theory · Computer Science 2013-11-27 Alois Dreyfus , Pierre-Cyrille Heam , Olga Kouchnarenko

We study transformations of 2-, 4- and 6-bit numbers in interactions between traveling and stationary localizations in the Spiral Rule reaction-diffusion cellular automaton. The Spiral Rule automaton is a hexagonal ternary-state…

Formal Languages and Automata Theory · Computer Science 2010-11-23 Andrew Adamatzky , Genaro Martinez , Liang Zhang , Andrew Wuensche

In the article a transition from pattern evolution equation of reaction-diffusion type to a cellular automaton (CA) is described. The applicability of CA is demonstrated by generating patterns of complex irregular structure on a hexagonal…

Graphics · Computer Science 2018-07-09 Lovrenc Švegl , Igor Grabec

Diffusion maps approximate the generator of Langevin dynamics from simulation data. They afford a means of identifying the slowly-evolving principal modes of high-dimensional molecular systems. When combined with a biasing mechanism,…

Data Analysis, Statistics and Probability · Physics 2020-07-01 Zofia Trstanova , Ben Leimkuhler , Tony Lelièvre

Many cellular and subcellular biological processes can be described in terms of diffusing and chemically reacting species (e.g. enzymes). Such reaction-diffusion processes can be mathematically modelled using either deterministic…

Biological Physics · Physics 2015-06-26 Radek Erban , S. Jonathan Chapman

The activity of biological cells is primarily based on chemical reactions and typically modeled as a reaction-diffusion system. Cells are, however, highly crowded with macromolecules, including a variety of molecular machines such as…

Biological Physics · Physics 2018-11-02 Yuichi Togashi

We study charge fluctuations of a family of stochastic charged cellular automata away from the deterministic single-file limit and obtain the exact typical charge probability distributions, known to be anomalous, using hydrodynamics. The…

Statistical Mechanics · Physics 2025-06-06 Takato Yoshimura , Žiga Krajnik

In this paper we use the cellular automaton (CA) approach to model one-dimensional binary diffusion in solids. Employing a very simple state change rule we define an asynchronous CA model and take its continuum limit to obtain the governing…

Computational Physics · Physics 2019-11-20 Helena Ribera , Brian Wetton , Timothy Myers

We propose an iterative algorithm to investigate the cooperative evolution dominated by information encoded within state spaces in a random quantum cellular automaton. Inspired by the 2-gram model in statistical linguistics, the updates of…

Quantum Physics · Physics 2025-04-22 Guanhua Chen , Yao Yao

This paper deals with the theory and application of 2-Dimensional, nine-neighborhood, null- boundary, uniform as well as hybrid Cellular Automata (2D CA) linear rules in image processing. These rules are classified into nine groups…

Discrete Mathematics · Computer Science 2008-04-16 Pabitra Pal Choudhury , Birendra Kumar Nayak , Sudhakar Sahoo , Sunil Pankaj Rath

We investigate the conditions under which the mean-field formulation of a probabilistic, totalistic cellular automaton approximates the logistic equation. We show that this goal can be only fulfilled for an infinite-range neighborhood. We…

Cellular Automata and Lattice Gases · Physics 2026-03-06 Franco Bagnoli

Localization phenomena permeate many branches of physics playing a fundamental role on dynamical processes evolving on heterogeneous networks. These localization analyses are frequently grounded, for example, on eigenvectors of adjacency or…

Physics and Society · Physics 2020-11-24 Diogo H. Silva , Silvio C. Ferreira

The one-dimensional three-state cyclic cellular automaton is a simple spatial model with three states in a cyclic "rock-paper-scissors" prey-predator relationship. Starting from a random configuration, similar states gather in increasingly…

Probability · Mathematics 2023-08-31 Benjamin Hellouin de Menibus , Yvan Le Borgne

In many complex systems, states and interaction structure coevolve towards a dynamic equilibrium. For the adaptive contact process, we obtain approximate expressions for the degree distributions that characterize the interaction network in…

Adaptation and Self-Organizing Systems · Physics 2015-07-01 Stefan Wieland , Ana Nunes

In this paper I present a first attempt for a possible description of fluids dynamics by mean of a cellular automata technique. With the use of simple and elementary rules, based on random behaviour either, the model permits to obtain the…

Computational Complexity · Computer Science 2007-05-23 Gianluca Argentini
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