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We consider the setting of Reeb graphs of piecewise linear functions and study distances between them that are stable, meaning that functions which are similar in the supremum norm ought to have similar Reeb graphs. We define an edit…

Algebraic Topology · Mathematics 2021-02-09 Ulrich Bauer , Claudia Landi , Facundo Memoli

Let $E \subset {\Bbb F}_q^d$, the $d$-dimensional vector space over a finite field with $q$ elements. Construct a graph, called the distance graph of $E$, by letting the vertices be the elements of $E$ and connect a pair of vertices…

Combinatorics · Mathematics 2014-06-03 M. Bennett , J. Chapman , D. Covert , D. Hart , A. Iosevich , J. Pakianathan

The distance metric plays an important role in nearest neighbor (NN) classification. Usually the Euclidean distance metric is assumed or a Mahalanobis distance metric is optimized to improve the NN performance. In this paper, we study the…

Machine Learning · Statistics 2007-06-26 Bharath K. Sriperumbudur , Gert R. G. Lanckriet

A random geometric graph, $G(n,r)$, is formed by choosing $n$ points independently and uniformly at random in a unit square; two points are connected by a straight-line edge if they are at Euclidean distance at most $r$. For a given…

Discrete Mathematics · Computer Science 2018-10-01 Ahmad Biniaz , Evangelos Kranakis , Anil Maheshwari , Michiel Smid

For a hereditary graph class $\mathcal{H}$, the $\mathcal{H}$-elimination distance of a graph $G$ is the minimum number of rounds needed to reduce $G$ to a member of $\mathcal{H}$ by removing one vertex from each connected component in each…

Data Structures and Algorithms · Computer Science 2021-06-09 Bart M. P. Jansen , Jari J. H. de Kroon

Graph representation learning plays an important role in many graph mining applications, but learning embeddings of large-scale graphs remains a problem. Recent works try to improve scalability via graph summarization -- i.e., they learn…

Machine Learning · Computer Science 2022-07-05 Houquan Zhou , Shenghua Liu , Danai Koutra , Huawei Shen , Xueqi Cheng

An important application of distance geometry to biochemistry studies the embeddings of the vertices of a weighted graph in the three-dimensional Euclidean space such that the edge weights are equal to the Euclidean distances between…

Computational Geometry · Computer Science 2011-03-08 Leo Liberti , Carlile Lavor , Benoit Masson , Antonio Mucherino

Many recent results in combinatorics concern the relationship between the size of a set and the number of distances determined by pairs of points in the set. One extension of this question considers configurations within the set with a…

Combinatorics · Mathematics 2019-05-29 David M. Soukup

Graph embedding techniques are useful to characterize spectral signature relations for hyperspectral images. However, such images consists of disjoint classes due to spatial details that are often ignored by existing graph computing tools.…

Computer Vision and Pattern Recognition · Computer Science 2012-11-29 Dalton Lunga 'and' Okan Ersoy

A mapping $\alpha : V(G) \to V(H)$ from the vertex set of one graph $G$ to another graph $H$ is an isometric embedding if the shortest path distance between any two vertices in $G$ equals the distance between their images in $H$. Here, we…

Discrete Mathematics · Computer Science 2021-12-21 Joseph Berleant , Kristin Sheridan , Anne Condon , Virginia Vassilevska Williams , Mark Bathe

Quaternion contains one real part and three imaginary parts, which provided a more expressive hypercomplex space for learning knowledge graph. Existing quaternion embedding models measure the plausibility of a triplet either through…

Machine Learning · Computer Science 2024-12-13 Weihua Wang , Qiuyu Liang , Feilong Bao , Guanglai Gao

A graph drawing in the plane is called an almost embedding if images of any two non-adjacent simplices (i.e. vertices or edges) are disjoint. We introduce integer invariants of almost embeddings: winding number, cyclic and triodic Wu…

Combinatorics · Mathematics 2024-11-19 E. Alkin , E. Bordacheva , A. Miroshnikov , O. Nikitenko , A. Skopenkov

Embedding graph nodes into a vector space can allow the use of machine learning to e.g. predict node classes, but the study of node embedding algorithms is immature compared to the natural language processing field because of a diverse…

Machine Learning · Computer Science 2018-02-20 Kento Nozawa , Masanari Kimura , Atsunori Kanemura

We present a method for balancing between the Local and Global Structures (LGS) in graph embedding, via a tunable parameter. Some embedding methods aim to capture global structures, while others attempt to preserve local neighborhoods. Few…

Human-Computer Interaction · Computer Science 2023-09-06 Jacob Miller , Vahan Huroyan , Stephen Kobourov

Graphs on integer points of polytopes whose edges come from a set of allowed differences are studied. It is shown that any simple graph can be embedded in that way. The minimal dimension of such a representation is the fiber dimension of…

Combinatorics · Mathematics 2016-01-19 Tobias Windisch

The Distance Geometry Problem asks for a realization of a given weighted graph in $\mathbb{R}^K$. Two variants of this problem, both originating from protein conformation, are based on a given vertex order (which abstracts the protein…

Computational Geometry · Computer Science 2021-10-05 Germano Abud , Jorge Alencar , Carlile Lavor , Leo Liberti , Antonio Mucherino

The construction of large-scale quantum computers will require modular architectures that allow physical resources to be localized in easy-to-manage packages. In this work, we examine the impact of different graph structures on the…

We prove that if a unimodular random graph is almost surely planar and has finite expected degree, then it has a combinatorial embedding into the plane which is also unimodular. This implies the claim in the title immediately by a theorem…

Probability · Mathematics 2025-02-14 Adam Timar

The \textit{biharmonic distance} (BD) is a fundamental metric that measures the distance of two nodes in a graph. It has found applications in network coherence, machine learning, and computational graphics, among others. In spite of BD's…

Social and Information Networks · Computer Science 2024-08-27 Changan Liu , Ahad N. Zehmakan , Zhongzhi Zhang

We study the interplay between embedding constrained planarity and hybrid planarity testing. We consider a constrained planarity testing problem, called 1-Fixed Constrained Planarity, and prove that this problem can be solved in quadratic…

Data Structures and Algorithms · Computer Science 2019-10-23 Giuseppe Liotta , Ignaz Rutter , Alessandra Tappini
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