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In this paper, it is presented a methodology for implementing arbitrarily constructed time-homogenous Markov chains with biochemical systems. Not only discrete but also continuous-time Markov chains are allowed to be computed. By employing…

Molecular Networks · Quantitative Biology 2018-02-16 Chuan Zhang , Ziyuan Shen , Wei Wei , Jing Zhao , Zaichen Zhang , Xiaohu You

We study the problem of characterizing the expected hitting times for a robust generalization of continuous-time Markov chains. This generalization is based on the theory of imprecise probabilities, and the models with which we work…

Probability · Mathematics 2022-06-28 Thomas Krak

In this note we derive the exact probability that a specific state in a two-state Markov chain is visited exactly $k$ times after $N$ transitions. We provide a closed-form solution for $\mathbb{P}(N_l = k \mid N)$, considering initial state…

Probability · Mathematics 2025-02-07 Mohammad Taha Shah

Markov Chains offer ideal conditions for the study and mathematical modelling of a certain kind of situations depending on random variables. The basic concepts of the corresponding theory were introduced by Markov in 1907 on coding literary…

Optimization and Control · Mathematics 2016-01-09 Michael Gr. Voskoglou

A simple linear algebraic explanation of the algorithm in "A Spectral Algorithm for Learning Hidden Markov Models" (COLT 2009). Most of the content is in Figure 2; the text just makes everything precise in four nearly-trivial claims.

Methodology · Statistics 2012-04-12 Matthew James Johnson

We introduce a natural conjugate prior for the transition matrix of a reversible Markov chain. This allows estimation and testing. The prior arises from random walk with reinforcement in the same way the Dirichlet prior arises from…

Statistics Theory · Mathematics 2007-06-13 Persi Diaconis , Silke W. W. Rolles

In this paper we investigate the continuum limits of a class of Markov chains. The investigation of such limits is motivated by the desire to model very large networks. We show that under some conditions, a sequence of Markov chains…

Networking and Internet Architecture · Computer Science 2011-06-22 Yang Zhang , Edwin K. P. Chong , Jan Hannig , Donald Estep

Extending recent work of Corrado, we derive an algorithm that computes rigorous upper and lower bounds for rectangle scan probabilities for Markov increments. We experimentally examine the closeness of the bounds computed by the algorithm…

Computation · Statistics 2011-09-16 Jannis Dimitriadis

We give computable bounds on the rate of convergence of the transition probabilities to the stationary distribution for a certain class of geometrically ergodic Markov chains. Our results are different from earlier estimates of Meyn and…

Probability · Mathematics 2007-05-23 Peter H. Baxendale

This paper studies various notions of approximate probabilistic bisimulation on labeled Markov chains (LMCs). We introduce approximate versions of weak and branching bisimulation, as well as a notion of $\varepsilon$-perturbed bisimulation…

Logic in Computer Science · Computer Science 2024-07-11 Timm Spork , Christel Baier , Joost-Pieter Katoen , Jakob Piribauer , Tim Quatmann

In this paper, we present a novel iterative Monte Carlo method for approximating the stationary probability of a single state of a positive recurrent Markov chain. We utilize the characterization that the stationary probability of a state…

Data Structures and Algorithms · Computer Science 2015-12-11 Christina E. Lee , Asuman Ozdaglar , Devavrat Shah

It has been well known for some time that for strictly stationary Markov chains that are ``reversible'', that special symmetry provides special extra features in the mathematical theory. This paper here is primarily a purely expository…

Probability · Mathematics 2019-10-04 Richard C. Bradley

We present a novel approach to detecting and utilizing symmetries in probabilistic graphical models with two main contributions. First, we present a scalable approach to computing generating sets of permutation groups representing the…

Artificial Intelligence · Computer Science 2014-08-12 Mathias Niepert

We present a novel approach to detecting and utilizing symmetries in probabilistic graphical models with two main contributions. First, we present a scalable approach to computing generating sets of permutation groups representing the…

Artificial Intelligence · Computer Science 2012-06-29 Mathias Niepert

We consider evaluation of proper posterior distributions obtained from improper prior distributions. Our context is estimating a bounded function $\phi$ of a parameter when the loss is quadratic. If the posterior mean of $\phi$ is…

Statistics Theory · Mathematics 2008-11-10 Morris L. Eaton , James P. Hobert , Galin L. Jones , Wen-Lin Lai

Correction for Adv. in Appl. Probab. 37, no. 3 (2005), 571-603

Probability · Mathematics 2007-05-23 E. Arias-Castro , D. L. Donoho , X. Huo , C. A. Tovey

For a Markov chain both the detailed balance condition and the cycle Kolmogorov condition are algebraic binomials. This remark suggests to study reversible Markov chains with the tool of Algebraic Statistics, such as toric statistical…

Statistics Theory · Mathematics 2011-03-31 Giovanni Pistone , Maria Piera Rogantin

Revised Version with corrections of misprints.

Condensed Matter · Physics 2009-10-22 Georg Junker , Hajo Leschke

We prove an analog of the classical Zero-One Law for both homogeneous and nonhomogeneous Markov chains (MC). Its almost precise formulation is simple: given any event $A$ from the tail $\sigma$-algebra of MC $(Z_n)$, for large $n$, with…

Probability · Mathematics 2020-11-10 Michael Grabchak , Isaac Sonin

This review paper is intended for the Handbook of Markov chain Monte Carlo's second edition. The authors will be grateful for any suggestions that could perfect it.

Computation · Statistics 2024-01-08 Radu V. Craiu , Xiao-Li Meng