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We prove that certain problems naturally arising in knot theory are NP--hard or NP--complete. These are the problems of obtaining one diagram from another one of a link in a bounded number of Reidemeister moves, determining whether a link…
We give methods for Bayesian inference of directed acyclic graphs, DAGs, and the induced causal effects from passively observed complete data. Our methods build on a recent Markov chain Monte Carlo scheme for learning Bayesian networks,…
The complexity class NP of decision problems that can be solved nondeterministically in polynomial time is of great theoretical and practical importance where the notion of polynomial-time reductions between NP-problems is a key concept for…
Learning the structure of causal directed acyclic graphs (DAGs) is useful in many areas of machine learning and artificial intelligence, with wide applications. However, in the high-dimensional setting, it is challenging to obtain good…
We introduce a novel class of labeled directed acyclic graph (LDAG) models for finite sets of discrete variables. LDAGs generalize earlier proposals for allowing local structures in the conditional probability distribution of a node, such…
Many applications in graph theory are motivated by routing or flow problems. Among these problems is Steiner Orientation: given a mixed graph G (having directed and undirected edges) and a set T of k terminal pairs in G, is there an…
Properties of graphs that can be characterized by the spectrum of the adjacency matrix of the graph have been studied systematically recently. Motivated by the complexity of these properties, we show that there are such properties for which…
In the Metric Dimension problem, one asks for a minimum-size set $R$ of vertices such that for any pair of vertices of the graph, there is a vertex from $R$ whose two distances to the vertices of the pair are distinct. This problem has…
Graph-structured data ubiquitously appears in science and engineering. Graph neural networks (GNNs) are designed to exploit the relational inductive bias exhibited in graphs; they have been shown to outperform other forms of neural networks…
In this paper the computational complexity of the (bi)simulation problem over restricted graph classes is studied. For trees given as pointer structures or terms the (bi)simulation problem is complete for logarithmic space or NC$^1$,…
When solving the Hamiltonian path problem it seems natural to be given additional precedence constraints for the order in which the vertices are visited. For example one could decide whether a Hamiltonian path exists for a fixed starting…
Counting and uniform sampling of directed acyclic graphs (DAGs) from a Markov equivalence class are fundamental tasks in graphical causal analysis. In this paper, we show that these tasks can be performed in polynomial time, solving a…
We resolve the longstanding open problem concerning the computational complexity of Max Cut on interval graphs by showing that it is NP-complete.
We propose an optimal algorithm for solving the longest path problem in undirected weighted graphs. By using graph partitioning and dynamic programming, we obtain an algorithm that is significantly faster than other state-of-the-art…
The study of mutual visibility has traditionally focused on undirected graphs, asking for the maximum number of vertices that can communicate via shortest paths without intermediate interference from other set members. In this paper, we…
The computation of short paths in graphs with arc lengths is a pillar of graph algorithmics and network science. In a more diverse world, however, not every short path is equally valuable. For the setting where each vertex is assigned to a…
This paper discusses the graph covering problem in which a set of edges in an edge- and node-weighted graph is chosen to satisfy some covering constraints while minimizing the sum of the weights. In this problem, because of the large…
Directed acyclic graphs whose nodes are all the divisors of a positive integer $n$ and arcs $(a,b)$ defined by $a$ divides $b$ are considered. Fourteen graph invariants such as order, size, and the number of paths are investigated for two…
A relation modification problem gets a logical structure and a natural number k as input and asks whether k modifications of the structure suffice to make it satisfy a predefined property. We provide a complete classification of the…
Finding Hamitonian Cycles in square grid graphs is a well studied and important questions. More recent work has extended these results to triangular and hexagonal grids, as well as further restricted versions. In this paper, we examine a…