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Traditional pairwise sequence alignment is based on matching individual samples from two sequences, under time monotonicity constraints. However, in many application settings matching subsequences (segments) instead of individual samples…

Databases · Computer Science 2016-09-28 Shahriar Shariat , Vladimir Pavlovic

A bottleneck plane perfect matching of a set of $n$ points in $\mathbb{R}^2$ is defined to be a perfect non-crossing matching that minimizes the length of the longest edge; the length of this longest edge is known as {\em bottleneck}. The…

Computational Geometry · Computer Science 2015-08-25 A. Karim Abu-Affash , Ahmad Biniaz , Paz Carmi , Anil Maheshwari , Michiel Smid

Two strings of the same length are said to Cartesian-tree match (CT-match) if their Cartesian-trees are isomorphic [Park et al., TCS 2020]. Cartesian-tree matching is a natural model that allows for capturing similarities of numerical…

Data Structures and Algorithms · Computer Science 2026-01-01 Taketo Tsujimoto , Yuki Yonemoto , Hiroki Shibata , Takuya Mieno , Yuto Nakashima , Shunsuke Inenaga

Recognizing textual entailment is a fundamental task in a variety of text mining or natural language processing applications. This paper proposes a simple neural model for RTE problem. It first matches each word in the hypothesis with its…

Computation and Language · Computer Science 2017-05-26 Zhipeng Xie , Junfeng Hu

Bayesian data analysis is widely used across many disciplines, and representative examples in materials science include spectral analysis and sparse modeling. In such applications, the underlying models often become complex and yield…

Information Theory · Computer Science 2026-03-04 Tomohiro Nabika , Kenji Nagata , Shun Katakami , Masaichiro Mizumaki , Masato Okada

Incorporating syntactic information in Neural Machine Translation models is a method to compensate their requirement for a large amount of parallel training text, especially for low-resource language pairs. Previous works on using syntactic…

Computation and Language · Computer Science 2017-11-27 Poorya Zaremoodi , Gholamreza Haffari

In this paper, we study the problem of locating a predefined sequence of patterns in a time series. In particular, the studied scenario assumes a theoretical model is available that contains the expected locations of the patterns. This…

Machine Learning · Computer Science 2018-02-20 Steven Van Vaerenbergh , Ignacio Santamaria , Victor Elvira , Matteo Salvatori

In recent years, the sequence-to-sequence learning neural networks with attention mechanism have achieved great progress. However, there are still challenges, especially for Neural Machine Translation (NMT), such as lower translation…

Computation and Language · Computer Science 2018-11-26 Si Zuo , Zhimin Xu

We study the problem of aligning multiple sequences with the goal of finding an alignment that either maximizes the number of aligned symbols (the longest common subsequence (LCS)), or minimizes the number of unaligned symbols (the…

Data Structures and Algorithms · Computer Science 2021-10-26 Debarati Das , Barna Saha

Sample average approximation (SAA) is a technique for obtaining approximate solutions to stochastic programs that uses the average from a random sample to approximate the expected value that is being optimized. Since the outcome from…

Optimization and Control · Mathematics 2026-01-22 Harshit Kothari , James R. Luedtke

Modeling the structure of coherent texts is a key NLP problem. The task of coherently organizing a given set of sentences has been commonly used to build and evaluate models that understand such structure. We propose an end-to-end…

Computation and Language · Computer Science 2017-12-25 Lajanugen Logeswaran , Honglak Lee , Dragomir Radev

Multiple sequence alignment is a key process in today's biology, and finding a relevant alignment of several sequences is much more challenging than just optimizing some improbable evaluation functions. Our approach for addressing multiple…

Quantitative Methods · Quantitative Biology 2008-12-18 Frédéric Guinand , Yoann Pigné

Inverse problems are in many cases solved with optimization techniques. When the underlying model is linear, first-order gradient methods are usually sufficient. With nonlinear models, due to nonconvexity, one must often resort to…

Numerical Analysis · Mathematics 2023-05-15 Arttu Arjas , Mikko J. Sillanpää , Andreas Hauptmann

Graph is a highly generic and diverse representation, suitable for almost any data processing problem. Spectral graph theory has been shown to provide powerful algorithms, backed by solid linear algebra theory. It thus can be extremely…

Computer Vision and Pattern Recognition · Computer Science 2023-04-20 Or Streicher , Ido Cohen , Guy Gilboa

We introduce a natural class of models of random chain complexes of real vector spaces that some classical ensembles of random matrices, the length $1$ case. We are interested here in the homological properties of these random complexes.…

Probability · Mathematics 2026-02-12 Ayat Ababneh , Matthew Kahle

We propose Bethe equations for the diagonalization of the Hamiltonian of quantum strings on AdS_5 x S^5 at large string tension and restricted to certain large charge states from a closed su(2) subsector. The ansatz differs from the…

High Energy Physics - Theory · Physics 2009-11-10 Gleb Arutyunov , Sergey Frolov , Matthias Staudacher

We formulate the algebraic Bethe ansatz solution of the SU(N) vertex models with rather general non-diagonal toroidal boundary conditions. The reference states needed in the Bethe ansatz construction are found by performing gauge…

Exactly Solvable and Integrable Systems · Physics 2015-06-26 G. A. P. Ribeiro , M. J. Martins , W. Galleas

In the field of natural language processing, correction of performance assessment for chance agreement plays a crucial role in evaluating the reliability of annotations. However, there is a notable dearth of research focusing on chance…

Computation and Language · Computer Science 2024-11-18 Diya Li , Carolyn Rosé , Ao Yuan , Chunxiao Zhou

We consider the problem of maximum a posteriori (MAP) inference in discrete graphical models. We present a parallel MAP inference algorithm called Bethe-ADMM based on two ideas: tree-decomposition of the graph and the alternating direction…

Artificial Intelligence · Computer Science 2013-09-27 Qiang Fu , Huahua Wang , Arindam Banerjee

We present the Bethe ansatz solution for the discrete time zero range and asymmetric exclusion processes with fully parallel dynamics. The model depends on two parameters: $p$, the probability of single particle hopping, and $q$, the…

Statistical Mechanics · Physics 2007-05-23 A. M. Povolotsky , J. F. F. Mendes