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Related papers: Noise enhanced persistence in a biochemical regula…

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We present a chemical reaction network that is unstable under deterministic mass action kinetics, exhibiting finite-time blow-up of trajectories in the interior of the state space, but whose stochastic counterpart is positive recurrent.…

Probability · Mathematics 2025-06-17 Andrea Agazzi , Lucie Laurence

We provide a simple framework for the study of parametric (multiplicative) noise, making use of scale parameters. We show that for a large class of stochastic differential equations increasing the multiplicative noise intensity surprisingly…

Statistical Mechanics · Physics 2024-11-22 Ewan T. Phillips , Benjamin Lindner , Holger Kantz

We explore the properties of discrete-time stochastic processes with a bounded state space, whose deterministic limit is given by a map of the unit interval. We find that, in the mesoscopic description of the system, the large jumps between…

Statistical Mechanics · Physics 2016-11-22 César Parra-Rojas , Joseph D. Challenger , Duccio Fanelli , Alan J. McKane

Contemporary technological challenges often involve many degrees of freedom in a distributed or networked setting. Three aspects are notable: the variables are usually associated with the nodes of a graph with limited communication…

Statistical Mechanics · Physics 2017-08-30 Nicolas Allegra , Bassam Bamieh , Partha P. Mitra , Clément Sire

The study of the noise induced effects on the dynamics of a chain molecule crossing a potential barrier, in the presence of a metastable state, is presented. A two-dimensional stochastic version of the Rouse model for a flexible polymer has…

Statistical Mechanics · Physics 2015-05-13 N. Pizzolato , A. Fiasconaro , B. Spagnolo

The noisy dynamics of chemical systems is commonly studied using either the chemical master equation (CME) or the chemical Fokker-Planck equation (CFPE). The latter is a continuum approximation of the discrete CME approach. We here show…

Quantitative Methods · Quantitative Biology 2015-06-22 Andrew Duncan , Shuohao Liao , Tomas Vejchodsky , Radek Erban , Ramon Grima

The effect of multiplicative white noise on the resonance capture in non-isochronous systems with time-decaying pumping is investigated. It is assumed that the intensity of perturbations decays with time, and its frequency is asymptotically…

Dynamical Systems · Mathematics 2025-03-11 Oskar A. Sultanov

In order to transmit biochemical signals, biological regulatory systems dissipate energy with concomitant entropy production. Additionally, signaling often takes place in challenging environmental conditions. In a simple model regulatory…

Molecular Networks · Quantitative Biology 2015-09-30 Francesca Mancini , Matteo Marsili , Aleksandra M. Walczak

We study systems of reaction-diffusion equations perturbed by multiplicative noise, where the reaction terms satisfy quasipositivity, a triangular mass-control structure, and polynomial growth. Our results apply to a broad class of…

Probability · Mathematics 2026-05-27 Dionysis Milesis , Michael Salins

The noise can stabilize a fluctuating or a periodically driven metastable state in such a way that the system remains in this state for a longer time than in the absence of white noise. This is the noise enhanced stability phenomenon,…

Statistical Mechanics · Physics 2007-05-23 Bernardo Spagnolo , Nikolay V. Agudov , Alexander A. Dubkov

A randomly interacting N-species Lotka-Volterra system in the presence of a Gaussian multiplicative noise is analyzed. The investigation is focused on the role of this external noise into the statistical properties of the extinction times…

Statistical Mechanics · Physics 2008-10-07 Alessandro Fiasconaro , Bernardo Spagnolo

The lifetime of a metastable state in the transient dynamics of an overdamped Brownian particle is analyzed, both in terms of the mean first passage time and by means of the mean growth rate coefficient. Both quantities feature non…

Statistical Mechanics · Physics 2009-11-11 A. Fiasconaro , B. Spagnolo , S. Boccaletti

Analytic, first-principles performance modeling of distributed-memory applications is difficult due to a wide spectrum of random disturbances caused by the application and the system. These disturbances (commonly called "noise") destroy the…

Performance · Computer Science 2020-06-25 Ayesha Afzal , Georg Hager , Gerhard Wellein

In spatially distributed cellular systems, it is often convenient to represent complicated auxiliary pathways and spatial transport by time-delayed reaction rates. Furthermore, many of the reactants appear in low numbers necessitating a…

Quantitative Methods · Quantitative Biology 2015-05-14 Matthew Scott

Modeling stochasticity in gene regulatory networks is an important and complex problem in molecular systems biology. To elucidate intrinsic noise, several modeling strategies such as the Gillespie algorithm have been used successfully. This…

Molecular Networks · Quantitative Biology 2013-01-18 David Murrugarra , Alan Veliz-Cuba , Boris Aguilar , Seda Arat , Reinhard Laubenbacher

Intra-cellular biochemical reactions exhibit a rich dynamical phenomenology which cannot be explained within the framework of mean-field rate equations and additive noise. Here, we show that the presence of metastable states and radically…

Statistical Mechanics · Physics 2012-08-02 Tommaso Biancalani , Tim Rogers , Alan J. McKane

Under natural assumptions, an unstable equilibrium of a difference equation can be stabilized by a bounded multiplicative noise, identically distributed at each step. This includes stabilization of an otherwise unstable positive equilibrium…

Dynamical Systems · Mathematics 2022-08-22 Elena Braverman , Alexandra Rodkina

We present a simple analytical tool which gives an approximate insight into the stationary behavior of nonlinear systems undergoing the influence of a weak and rapid noise from one dominating source, e.g. the kinetic equations describing a…

Quantitative Methods · Quantitative Biology 2008-08-13 Anna Ochab-Marcinek

Genes and proteins regulate cellular functions through complex circuits of biochemical reactions. Fluctuations in the components of these regulatory networks result in noise that invariably corrupts the signal, possibly compromising…

Molecular Networks · Quantitative Biology 2016-03-15 Michael Hinczewski , D. Thirumalai

Homeostasis is a running theme in biology. Often achieved through feedback regulation strategies, homeostasis allows living cells to control their internal environment as a means for surviving changing and unfavourable environments. While…

Optimization and Control · Mathematics 2016-01-29 Corentin Briat , Ankit Gupta , Mustafa Khammash
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