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We study the geometry of a semiflexible polymer at finite temperatures. The writhe can be calculated from the properties of Gaussian random walks on the sphere. We calculate static and dynamic writhe correlation functions. The writhe of a…

Soft Condensed Matter · Physics 2009-10-31 A. C. Maggs

We consider the unbinding of a directed polymer in a random media from a wall in $d=1+1$ dimensions and a simple one-dimensional model for DNA unzipping. Using the replica trick we show that the restricted partition functions of these…

Statistical Mechanics · Physics 2007-05-23 Yariv Kafri , Anatoli Polkovnikov

The late-time distribution function P(x,t) of a particle diffusing in a one-dimensional logarithmic potential is calculated for arbitrary initial conditions. We find a scaling solution with three surprising features: (i) the solution is…

Statistical Mechanics · Physics 2011-12-15 Ori Hirschberg , David Mukamel , Gunter M. Schütz

A previous analysis of scaling, bounds, and inequalities for the non-interacting functionals of thermal density functional theory is extended to the full interacting functionals. The results are obtained from analysis of the related…

Statistical Mechanics · Physics 2016-12-14 James W. Dufty , S. B. Trickey

Hydrodynamic forces may significantly affect the motion of polymers. In sheet-like cavities, such as the cell's cytoplasm and microfluidic channels, the hydrodynamic forces are long-range. It is therefore expected that that hydrodynamic…

Soft Condensed Matter · Physics 2010-08-04 Tsvi Tlusty

Polymer models describing the statistics of biomolecules under confinement have applications to a wide range of single molecule experimental techniques and give insight into biologically relevant processes {\em{in vivo}}. In this paper, we…

Biological Physics · Physics 2023-09-18 Joel Gard , Greg Morrison

A fundamental paradigm in polymer physics is that macromolecular conformations in equilibrium can be described by universal scaling laws, being key for structure, dynamics, and function of soft (biological) matter and in the materials…

Soft Condensed Matter · Physics 2021-09-22 Michael Bley , Upayan Baul , Joachim Dzubiella

We study the two-point correlation function in the model of branched polymers and its relation to the critical behaviour of the model. We show that the correlation function has a universal scaling form in the generic phase with the only…

High Energy Physics - Lattice · Physics 2009-10-30 P. Bialas , Z. Burda , J. Jurkiewicz

We study asymptotic properties of diffusion and other transport processes (including self-avoiding walks and electrical conduction) on large randomly branched polymers using renormalized dynamical field theory. We focus on the swollen phase…

Statistical Mechanics · Physics 2015-06-04 Hans-Karl Janssen , Olaf Stenull

We study the behavior of fluids, confined by geometrically structured substrates, upon approaching a critical point at T = Tc in their bulk phase diagram. As generic substrate structures periodic arrays of wedges and ridges are considered.…

Soft Condensed Matter · Physics 2008-10-31 M. Tröndle , L. Harnau , S. Dietrich

Topological entanglements in polymers are mimicked by sliding rings (slip-links) which enforce pair contacts between monomers. We study the force-extension curve for linear polymers in which slip-links create additional loops of variable…

Statistical Mechanics · Physics 2009-11-07 Ralf Metzler , Yacov Kantor , Mehran Kardar

Monte Carlo simulations are used to study the behavior of two polymers under confinement in a cylindrical tube. Each polymer is modeled as a chain of hard spheres. We measure the free energy of the system, F, as a function of the distance…

Soft Condensed Matter · Physics 2015-06-22 James M. Polson , Logan G. Montgomery

We perform a Monte Carlo study of $N$-step self-avoiding walks, attached to the corner of an impenetrable wedge in two dimensions ($d=2$), or the tip of an impenetrable cone in $d=3$, of sizes ranging up to $N=10^6$ steps. We find that the…

Statistical Mechanics · Physics 2015-12-22 Yosi Hammer , Yacov Kantor

Recent experiments of imbibition in columnar geometries show interfacial fluctuations whose dynamic scaling is not compatible with the usual non local model governed by surface tension that results from a macroscopic description. To explore…

Statistical Mechanics · Physics 2009-11-13 M. Pradas , A. Hernández-Machado , M. A. Rodríguez

Passive scalar dynamics in wall-bounded turbulence is studied via Direct Numerical Simulations of plane channel flow, for a friction Reynolds number $Re_* = 160$ and a Schmidt number $Sc=1$. Peculiar to the present research is that the…

Fluid Dynamics · Physics 2015-03-17 Luca Galantucci , Maurizio Quadrio

Let $G$ be a directed graph on finitely many vertices and edges, and assign a positive weight to each edge on $G$. Fix vertices $u$ and $v$ and consider the set of paths that start at $u$ and end at $v$, self-intersecting in any number of…

Probability · Mathematics 2013-06-13 R. Edwards , E. Foxall , T. J. Perkins

In this paper, we investigate a model for a $1+1$ dimensional self-interacting and partially directed self-avoiding walk, usually referred to by the acronym IPDSAW. The interaction intensity and the free energy of the system are denoted by…

Probability · Mathematics 2015-07-29 P. Carmona , G. B. Nguyen , N. Pétrélis

By analyzing the real space nonequilibrium dynamics of polymers, we elucidate the physics of driven translocation and propose its dynamical scaling scenario analogous to that in the surface growth phenomena. We provide a detailed account of…

Soft Condensed Matter · Physics 2011-11-28 Takuya Saito , Takahiro Sakaue

We develop an approach for performing scaling analysis of $N$-step Random Walks (RWs). The mean square end-to-end distance, $\langle\vec{R}_{N}^{2}\rangle$, is written in terms of inner persistence lengths (IPLs), which we define by the…

Statistical Mechanics · Physics 2016-05-18 C. R. F. Granzotti , A. S. Martinez , M. A. A. da Silva

Shape transformations of hairy nanoparticles under confinement are studied using molecular dynamic simulations. We discuss the behavior of these particles in slits with inert or attractive walls. We assume that only chain-wall interactions…

Soft Condensed Matter · Physics 2022-10-04 T. Staszewski , M. Borówko
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