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Redundancies and correlations in the responses of sensory neurons seem to waste neural resources but can carry cues about structured stimuli and may help the brain to correct for response errors. To assess how the retina negotiates this…

Neurons and Cognition · Quantitative Biology 2014-03-05 K. D. Simmons , J. S. Prentice , G. Tkacik , J. Homann , H. K. Yee , S. E. Palmer , P. C. Nelson , V. Balasubramanian

Retinal circuitry transforms spatiotemporal patterns of light into spiking activity of ganglion cells, which provide the sole visual input to the brain. Recent advances have led to a detailed characterization of retinal activity and…

Neurons and Cognition · Quantitative Biology 2016-05-12 Vicente Botella-Soler , Stéphane Deny , Olivier Marre , Gašper Tkačik

To understand possible strategies of temporal spike coding in the central nervous system, we study functional neuromimetic models of visual processing for static images. We will first present the retinal model which was introduced by Van…

Neurons and Cognition · Quantitative Biology 2007-05-23 Laurent Perrinet , Manuel Samuelides , Simon Thorpe

While traditional feed-forward filter models can reproduce the rate responses of retinal ganglion neurons to simple stimuli, they cannot explain why synchrony between spikes is much higher than expected by Poisson firing [6], and can be…

Neurons and Cognition · Quantitative Biology 2020-05-07 Christopher Warner , Friedrich T. Sommer

Natural images follow statistics inherited by the structure of our physical (visual) environment. In particular, a prominent facet of this structure is that images can be described by a relatively sparse number of features. To investigate…

Neurons and Cognition · Quantitative Biology 2022-01-07 Cesar Ravello , Maria-Jose Escobar , Adrian Palacios , Laurent Perrinet

We present a method to estimate Gibbs distributions with \textit{spatio-temporal} constraints on spike trains statistics. We apply this method to spike trains recorded from ganglion cells of the salamander retina, in response to natural…

Neurons and Cognition · Quantitative Biology 2013-01-11 J. C. Vasquez , O. Marre , A. G. Palacios , M. J. Berry , B. Cessac

We tested the hypothesis that the neural code of retinal ganglion cells is optimized to transmit visual information at minimal metabolic cost. Under a broad ensemble of light patterns, ganglion cell spike trains consisted of sparse, precise…

Soft Condensed Matter · Physics 2007-05-23 Vijay Balasubramanian , Michael J Berry

Background: Spatio-temporal receptive fields (STRF) of visual neurons are often estimated using spike-triggered averaging of binary pseudo-random stimulus sequences. The stimuli are visual displays that contain black and white pixels that…

Quantitative Methods · Quantitative Biology 2024-08-16 Murat Okatan

We demonstrate that the information contained in the spike occurrence times of a population of neurons can be broken up into a series of terms, each of which reflect something about potential coding mechanisms. This is possible in the…

Biological Physics · Physics 2007-05-23 S. Panzeri , S. R. Schultz

The relative timing of action potentials in neurons recorded from local cortical networks often shows a non-trivial dependence, which is then quantified by cross-correlation functions. Theoretical models emphasize that such spike train…

Neurons and Cognition · Quantitative Biology 2017-06-28 Taskin Deniz , Stefan Rotter

We describe a new, computationally simple method for analyzing the dynamics of neuronal spike trains driven by external stimuli. The goal of our method is to test the predictions of simple spike-generating models against extracellularly…

Neurons and Cognition · Quantitative Biology 2007-05-23 Daniel S. Reich , Jonathan D. Victor , Bruce W. Knight

Dynamics and function of neuronal networks are determined by their synaptic connectivity. Current experimental methods to analyze synaptic network structure on the cellular level, however, cover only small fractions of functional neuronal…

Neurons and Cognition · Quantitative Biology 2015-07-28 Yury V. Zaytsev , Abigail Morrison , Moritz Deger

The inverse Ising model is used in computational neuroscience to infer probability distributions of the synchronous activity of large neuronal populations. This method allows for finding the Boltzmann distribution with single neuron biases…

Neurons and Cognition · Quantitative Biology 2022-07-27 Geoffroy Delamare , Ulisse Ferrari

The retina is the entrance of the visual system. Although based on common biophysical principles the dynamics of retinal neurons is quite different from their cortical counterparts, raising interesting problems for modellers. In this paper…

Dynamical Systems · Mathematics 2022-01-20 Bruno Cessac

Thalamic relay cells fire action potentials that transmit information from retina to cortex. The amount of information that spike trains encode is usually estimated from the precision of spike timing with respect to the stimulus. Sensory…

A main concern in cognitive neuroscience is to decode the overt neural spike train observations and infer latent representations under neural circuits. However, traditional methods entail strong prior on network structure and hardly meet…

Neurons and Cognition · Quantitative Biology 2019-11-22 Zhijie Chen , Junchi Yan , Longyuan Li , Xiaokang Yang

Sensory stimuli in animals are encoded into spike trains by neurons, offering advantages such as sparsity, energy efficiency, and high temporal resolution. This paper presents a signal processing framework that deterministically encodes…

Neural and Evolutionary Computing · Computer Science 2024-08-15 Anik Chattopadhyay , Arunava Banerjee

Sampling considerations limit the experimental conditions under which information theoretic analyses of neurophysiological data yield reliable results. We develop a procedure for computing the full temporal entropy and information of…

Biological Physics · Physics 2009-11-06 Simon R. Schultz , Stefano Panzeri

We address the problem of finding patterns from multi-neuronal spike trains that give us insights into the multi-neuronal codes used in the brain and help us design better brain computer interfaces. We focus on the synchronous firings of…

Neural and Evolutionary Computing · Computer Science 2010-06-09 Raajay Viswanathan , P. S. Sastry , K. P. Unnikrishnan

A major goal in neuroscience is to understand how populations of neurons code for stimuli or actions. While the number of neurons that can be recorded simultaneously is increasing at a fast pace, in most cases these recordings cannot access…

Neurons and Cognition · Quantitative Biology 2019-04-10 Oleksandr Sorochynskyi , Stéphane Deny , Olivier Marre , Ulisse Ferrari
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