Related papers: Controlling Secondary Structures of Bio-Polymers w…
We study a system of particles in two dimensions interacting via a dipolar long-range potential $D/r^3$ and subject to a square-lattice substrate potential $V({\bf r})$ with amplitude $V$ and lattice constant $b$. The isotropic interaction…
We study the quantum phase diagrams of Bose-Fermi mixtures of ultracold atoms confined to one dimension in an optical lattice. For systems with incommensurate densities, various quantum phases, e.g. charge/spin density waves, pairing, phase…
Phase separation, crucial for spatially segregating biomolecules in cells, is well-understood in the simple case of a few components with pairwise interactions. Yet, biological cells challenge the simple picture in at least two ways: First,…
Proteins in photosynthetic membranes can organize into patterned arrays that span the membrane's lateral size. Attractions between proteins in different layers of a membrane stack can play a key role in this ordering, as was suggested by…
By performing density functional theory-based calculations, we investigate how hydrogen atom interacts with the surfaces of monolayer PbI2 and how one and two side hydrogenation modify its structural, electronic, and magnetic properties.…
It is shown that, in a reasonable approximation, the quantum state of $p$-bosons in a bi-partite square two-dimensional optical lattice is governed by the nonlinear boson model describing tunneling of \textit{boson pairs} between two…
Motivated by the structure of networks of cross-linked cytoskeletal biopolymers, we study the orientationally ordered phases in two-dimensional networks of randomly cross-linked semiflexible polymers. We consider permanent cross-links which…
Controlling the viscoelastic properties of hydrogels is a challenge for many applications. Low molecular weight gelators (LMWG) like bile salts and glycolipids, and biopolymers like chitosan and alginate, are good candidates for developing…
We consider the vortex structure of a rapidly rotating trapped atomic Bose-Einstein condensate in the presence of a co-rotating periodic optical lattice potential. We observe a rich variety of structural phases which reflect the interplay…
The phase diagram of the collapse of a two-dimensional infinite branched polymer interacting with the solvent and with itself through contact interactions is studied from the $q\to 1$ limit of an extension of the $q-$ states Potts model.…
Phase diagrams of charged semi-hard-core bosons are studied in the mean field approximation. An increase in the parameter of local correlations is shown to lead to the transformation of the phase diagram of the system from the form…
This paper reviews recent Monte Carlo simulation studies of the glassy behavior in thin polymer films. The simulations employ a version of the bond-fluctuation lattice model, in which the glass transition is driven by the competition…
Within a lattice model describing a binary mixture with fixed concentrations of the species we discuss the relation-ship between the surface tension of the mixture and the concentrations.
Understanding the mechanism of protein secondary structure formation is an essential part of protein-folding puzzle. Here we describe a simple model for the formation of the $\beta$-hairpin, motivated by the fact that folding of a…
Within self-consistent field theory we study the phase behavior of a symmetrical binary AB polymer blend confined into a thin film. The film surfaces interact with the monomers via short range potentials. One surface attracts the A…
The structure, lattice dynamics and mechanical properties of the magnesium hydroxide have been investigated with static density functional theory calculations as well as \it {ab initio} molecular dynamics. The hypothesis of a superstructure…
A numerical study on the elastic response of single- and multi-layer systems formed by alternating pentamode lattices and stiffening plates is presented. Finite element simulations are conducted to analyze the dependence of the effective…
A phase-separation front will leave in its wake a phase-separated morphology that differs markedly from homogeneous phase-separation morphologies. For a purely diffusive system such a front, moving with constant velocity, will generate very…
Optical lattice systems provide exceptional platforms for quantum simulation of many-body systems. We focus on the doubly modulated Bose-Hubbard model driven by both time-dependent on-site energy and interaction, and predict the emergence…
Associative polymer networks have shown a major promise in fabrication of self-healing and responsive materials. The can also serve as simple models to study more complex biological systems where transient interactions play an important…