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We have extended our previously developed 3D multi-scale agent-based brain tumor model to simulate cancer heterogeneity and to analyze its impact across the scales of interest. While our algorithm continues to employ an epidermal growth…

Tissues and Organs · Quantitative Biology 2010-03-23 Le Zhang , Costas G. Strouthos , Zhihui Wang , Thomas S. Deisboeck

Mutations in the epidermal growth factor receptor (EGFR) are common in non-small cell lung cancer (NSCLC), particularly in never-smoker patients. However, these mutations are not always carcinogenic, and have recently been reported in…

Cell Behavior · Quantitative Biology 2024-03-12 Helena Coggan , Clare E. Weeden , Philip Pearce , Mohit P. Dalwadi , Alastair Magness , Charles Swanton , Karen M. Page

We studied the effects of epidermal growth factor receptor (EGFR) density on tumor growth dynamics, both on the sub- and the multi-cellular level using our previously developed model. This algorithm simulates the growth of a brain tumor…

Cell Behavior · Quantitative Biology 2007-05-23 Chaitanya A. Athale , Thomas S. Deisboeck

Experimental evidence suggests that epidermal growth factor receptor (EGFR)-mediated activation of the signaling protein phospholipase C gamma plays a critical role in a cancer cell's phenotypic decision to either proliferate or to migrate…

Tissues and Organs · Quantitative Biology 2007-05-23 Le Zhang , Chaitanya A. Athale , Thomas S. Deisboeck

Experimental evidence indicates that human brain cancer cells proliferate or migrate, yet do not display both phenotypes at the same time. Here, we present a novel computational model simulating this cellular decision-process leading up to…

Cell Behavior · Quantitative Biology 2007-05-23 Chaitanya Athale , Yuri Mansury , Thomas S. Deisboeck

Formulating tumor models that predict growth under therapy is vital for improving patient-specific treatment plans. In this context, we present our recent work on simulating non-small-scale cell lung cancer (NSCLC) in a simple,…

In advancing discrete-based computational cancer models towards clinical applications, one faces the dilemma of how to deal with an ever growing amount of biomedical data that ought to be incorporated eventually in one form or another.…

Cell Behavior · Quantitative Biology 2008-06-26 Le Zhang , L. Leon Chen , Thomas S. Deisboeck

Over the last two decades epidermal growth factor receptor (EGFR) kinase has become an important target to treat non-small cell lung cancer (NSCLC). Currently, three generations of EGFR kinase-targeted small molecule drugs have been FDA…

Molecular Networks · Quantitative Biology 2018-12-31 Zheng Zhao , Lei Xie , Philip E. Bourne

The main obstacle to effective cancer treatment is the development of drug resistance, which can be divided into two categories: spontaneous and acquired drug resistance. Non-small cell lung cancer (NSCLC) is the main cause of…

Numerical Analysis · Mathematics 2025-05-29 Louis Shuo Wang , Jiguang Yu , Zonghao Liu

Predicting tumor evolution during radiotherapy is a clinically critical challenge, particularly when longitudinal changes are driven by both anatomy and treatment. In this work, we introduce a Virtual Treatment (VT) framework that…

The primary activation of the epidermal growth factor receptor (EGFR) has become a prominent target for molecular therapies against several forms of cancer. But despite considerable progress during the last years, many of its aspects remain…

Molecular Networks · Quantitative Biology 2008-03-19 Garrit Jentsch , Reiner Kree

First-line antiproliferatives for non-small cell lung cancer (NSCLC) have a relatively high failure rate due to high intrinsic resistance rates and acquired resistance rates to therapy. 57% patients are diagnosed in late-stage disease due…

Cell Behavior · Quantitative Biology 2024-01-17 Benjamin Schneider , Sébastien Benzekry , Jonathan Mochel

Lung cancer is the primary cause of cancer death globally, with non-small cell lung cancer (NSCLC) emerging as its most prevalent subtype. Among NSCLC patients, approximately 32.3% have mutations in the epidermal growth factor receptor…

Local cancer cell invasion is a complex process involving many cellular and tissue interactions and is an important prerequisite for metastatic spread, the main cause of cancer related deaths. Occurring over many different temporal and…

Tissues and Organs · Quantitative Biology 2019-07-03 Robyn Shuttleworth , Dumitru Trucu

We propose a multiscale model of the invasion of the extracellular matrix by two types of cancer cells, the differentiated cancer cells and the cancer stem cells. We assume that the epithelial mesenchymal-like transition between them is…

Cell Behavior · Quantitative Biology 2016-04-19 Nikolaos Sfakianakis , Niklas Kolbe , Nadja Hellmann , Maria Lukacova-Medvidova

In this study we investigate computationally tumour-oncolytic virus(OV) interactions that take place within a heterogeneous ExtraCellular Matrix (ECM). The ECM is viewed as a mixture of two constitutive phases, namely a fibre phase and a…

Dynamical Systems · Mathematics 2021-12-21 Abdulhamed Alsisi , Raluca Eftimie , Dumitru Trucu

Non-small cell lung cancer (NSCLC) is often intrinsically resistant to several first- and second-line therapeutics and can rapidly acquire further resistance after a patient begins receiving treatment. Treatment outcomes are therefore…

Biomolecules · Quantitative Biology 2024-10-23 Benjamin K. Schneider , Sebastien Benzekry , Jonathan P. Mochel

Identifying actionable driver mutations in non-small cell lung cancer (NSCLC) can impact treatment decisions and significantly improve patient outcomes. Despite guideline recommendations, broader adoption of genetic testing remains…

Image and Video Processing · Electrical Eng. & Systems 2025-09-09 Biagio Brattoli , Jack Shi , Jongchan Park , Taebum Lee , Donggeun Yoo , Sergio Pereira

Tumor-immune interactions are central to cancer progression and treatment outcomes. In this study, we present a stochastic agent-based model that integrates cellular heterogeneity, spatial cell-cell interactions, and drug resistance…

Tissues and Organs · Quantitative Biology 2026-05-19 Yuhong Zhang , Chenghang Li , Boya Wang , Jinzhi Lei

We present and analyse a model for cell signalling processes in biological tissues. The model includes diffusion and nonlinear reactions on the cell surfaces, and both inter- and intracellular signalling. Using techniques from the theory of…

Analysis of PDEs · Mathematics 2020-03-12 Mariya Ptashnyk , Chandrasekhar Venkataraman
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