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Related papers: A Bell-Evans-Polanyi principle for molecular dynam…

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Within a fully microscopic setting, we derive a variational principle for the non-equilibrium steady states of chemical reaction networks, valid for time-scales over which chemical potentials can be taken to be slowly varying: at…

Molecular Networks · Quantitative Biology 2015-06-05 Andrea De Martino , Daniele De Martino , Roberto Mulet , Guido Uguzzoni

Classically encountered problem of acceleration runaway in radiative motion of a charged-particle is addressed by considering the criterion of minimum radiation loss under optimum displacement in variationally referred dynamic course in…

Classical Physics · Physics 2021-08-16 D. Das

We propose a protocol that, given a communication network, computes a subnetwork such that, for every pair $(u,v)$ of nodes connected in the original network, there is a minimum-energy path between $u$ and $v$ in the subnetwork (where a…

Networking and Internet Architecture · Computer Science 2007-05-23 Erran L. Li , Joseph Y. Halpern

Since molecular energy transformations are responsible for chemical reaction rates at the most fundamental level, chemical kinetics should provide some information about molecular energies. This is the premise and objective of this note. We…

Chemical Physics · Physics 2007-06-07 Robert W. Finkel

We consider a novel approach for the enhancement of fluid mixing via pure stirring strategies building upon the Least Action Principle (LAP) for incompressible flows. The LAP is formally analogous to the Benamou--Brenier formulation of…

Optimization and Control · Mathematics 2026-01-21 Weiwei Hu , Ming-Jun Lai , Hao-Ning Wu

Active control of quantum systems enables diverse applications ranging from quantum computation to manipulation of molecular processes. Maximum speeds and related bounds have been identified from uncertainty principles and related…

Quantum Physics · Physics 2021-09-15 Hanwen Zhang , Zeyu Kuang , Shruti Puri , Owen D. Miller

Optimization of cyclic stochastic heat engines, a topic spanning decades of research, commonly assumes fixed control or response parameters at discrete points in the cycle-a limitation that often leads to experimentally impractical…

Statistical Mechanics · Physics 2025-07-02 Monojit Chatterjee , Viktor Holubec , Rahul Marathe

We propose a novel approach in the study of transport phenomena in dense systems or systems with long range interactions where multiple particle interactions must be taken into consideration. Within Boltzmann's kinetic formalism, we study…

Classical Physics · Physics 2015-06-26 Travis J. Sherman , Johann Rafelski

The dynamics of binary colloidal mixture subjected to an external potential barrier is investigated using molecular dynamics simulations. The depletion interactions between the potential barrier and larger components of the mixture alters…

Soft Condensed Matter · Physics 2020-11-05 Mahammad Mustakim , A. V. Anil Kumar

Formulating the equations of motion for cosmological bodies (such as galaxies) in an integral, rather than differential, form has several advantages. Using an integral the mathematical instability at early times is avoided and the boundary…

Astrophysics · Physics 2009-10-31 Alan B. Whiting

Quantum chemical studies of reactivity involve calculations on a large number of molecular structures and comparison of their energies. Already the set-up of these calculations limits the scope of the results that one will obtain, because…

Computational Physics · Physics 2016-08-23 Alain C. Vaucher , Markus Reiher

We consider the roaming mechanism for chemical reactions under the nonholonomic constraint of constant kinetic energy. Our study is carried out in the context of the Hamiltonian isokinetic thermostat applied to Chesnavich's model for an…

Chaotic Dynamics · Physics 2019-12-11 Vladimír Krajňák , Gregory S. Ezra , Stephen Wiggins

Optimal processes in stochastic thermodynamics are a frontier for understanding the control and design of non-equilibrium systems, with broad practical applications in biology, chemistry, and nanoscale/mesoscale systems. Optimal mass…

Statistical Mechanics · Physics 2026-01-15 Atul Tanaji Mohite , Heiko Rieger

Currently, molecular tunnel junctions are recognized as important active elements of various nanodevices. This gives a strong motivation to study physical mechanisms controlling electron transport through molecules. Electron motion through…

Mesoscale and Nanoscale Physics · Physics 2013-01-24 Natalya A. Zimbovskaya

Characterizing conformational transitions in physical systems remains a fundamental challenge, as traditional sampling methods struggle with the high-dimensional nature of molecular systems and high-energy barriers between stable states.…

Chemical Physics · Physics 2025-09-22 Magnus Petersen , Gemma Roig , Roberto Covino

The motion of molecules across channels is critically important for understanding mechanisms of cellular processes. Here we investigate the mechanism of interactions in the molecular transport by analyzing exactly solvable discrete…

Soft Condensed Matter · Physics 2015-05-18 Anatoly B. Kolomeisky , Karthik Uppulury

Stochastic thermodynamics provides a framework for describing small systems like colloids or biomolecules driven out of equilibrium but still in contact with a heat bath. Both, a first-law like energy balance involving exchanged heat and…

Statistical Mechanics · Physics 2012-05-21 Udo Seifert

We establish that the exact quantum dynamics of a Brownian particle in the Caldeira-Leggett model can be mapped, at any temperature, onto a classical, non-Markovian stochastic process in phase space. Starting from a correlated thermal…

Quantum Physics · Physics 2025-12-11 Dmitriy Kondaurov , Evgeny Polyakov

Molecular motors play pivotal roles in organizing the interior of cells. A motor efficient in cargo transport would move along cytoskeletal filaments with a high speed and a minimal error in transport distance (or time) while consuming a…

Biological Physics · Physics 2019-06-07 Wonseok Hwang , Changbong Hyeon

Previous studies have used numerical methods to optimize the hyperpolarizability of a one-dimensional quantum system. These studies were used to suggest properties of one-dimensional organic molecules, such as the degree of modulation of…

Optics · Physics 2015-05-18 Urszula B. Szafruga , Mark G. Kuzyk , David S. Watkins