Related papers: A tree without leaves
Several real-world and abstract structures and systems are characterized by marked hierarchy to the point of being expressed as trees. Because the study of these entities often involves sampling (or discovering) the tree nodes in a specific…
A pebble tree is an ordered tree where each node receives some colored pebbles, in such a way that each unary node receives at least one pebble, and each subtree has either one more or as many leaves as pebbles of each color. We show that…
In this work, we answer an open problem in the study of phylogenetic networks. Phylogenetic trees are rooted binary trees in which all edges are directed away from the root, whereas phylogenetic networks are rooted acyclic digraphs. For the…
We introduce a new phylogenetic reconstruction algorithm which, unlike most previous rigorous inference techniques, does not rely on assumptions regarding the branch lengths or the depth of the tree. The algorithm returns a forest which is…
The problem of reconstructing evolutionary trees or phylogenies is of great interest in computational biology. A popular model for this problem assumes that we are given the set of leaves (current species) of an unknown binary tree and the…
Levy-Longo Trees and Bohm Trees are the best known tree structures on the {\lambda}-calculus. We give general conditions under which an encoding of the {\lambda}-calculus into the {\pi}-calculus is sound and complete with respect to such…
In this paper, we give a new representation of the Fibonacci numbers. This is achieved using Fibonacci trees. With the help of this representation, the nth Fibonacci number can be calculated without having any knowledge about the previous…
To most mathematicians and computer scientists the word ``tree'' conjures up, in addition to the usual image, the image of a connected graph with no circuits. In the last few years various types of trees have been the subject of much…
The Tribonacci sequence $\mathbb{T}$ is the fixed point of the substitution $\sigma(a,b,c)=(ab,ac,a)$. In this note, we get the explicit expressions of all squares, and then establish the tree structure of the positions of repeated squares…
Understanding the evolution of a set of genes or species is a fundamental problem in evolutionary biology. The problem we study here takes as input a set of trees describing {possibly discordant} evolutionary scenarios for a given set of…
One of the main virtues of trees is to represent formal solutions of various functional equations which can be cast in the form of fixed point problems. Basic examples include differential equations and functional (Lagrange) inversion in…
Let $T$ be a tree, we show that the null space of the adjacency matrix of $T$ has relevant information about the structure of $T$. We introduce the Null Decomposition of trees, and use it in order to get formulas for independence number and…
Trees are partial orders in which every element has a linearly ordered set of predecessors. Here we initiate the exploration of the structural theory of trees with the study of different notions of \emph{branching in trees} and of…
Puzzle solving is a difficult problem in its own right, even when the pieces are all square and build up a natural image. But what if these ideal conditions do not hold? One such application domain is archaeology, where restoring an…
We apply the theory of markov random fields on trees to derive a phase transition in the number of samples needed in order to reconstruct phylogenies. We consider the Cavender-Farris-Neyman model of evolution on trees, where all the inner…
Disjoint-Set forests, consisting of Union-Find trees are data structures having a widespread practical application due to their efficiency. Despite them being well-known, no exact structural characterization of these trees is known (such a…
We propose a new arithmetic for non-empty rooted unordered trees simply called trees. After discussing tree representation and enumeration, we define the operations of tree addition, multiplication and stretch, prove their properties, and…
In this note we analyze the performance of a simple root-finding algorithm in uniform attachment trees. The leaf-stripping algorithm recursively removes all leaves of the tree for a carefully chosen number of rounds. We show that, with…
We consider the process of uncovering the vertices of a random labeled tree according to their labels. First, a labeled tree with $n$ vertices is generated uniformly at random. Thereafter, the vertices are uncovered one by one, in order of…
The uncertainty of multidimensional shift spaces draws attracted attention of researchers. For example, the emptiness problem is undecidable; there exist aperiodic shifts of finite type; there is a nonempty shift of finite type exhibiting…