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Unlocking n-alk-1-ynes Conformers: Quantum "Trigger Finger" versus "Stiff Joint" Conformations

Chemical Physics 2025-11-05 v1 Mesoscale and Nanoscale Physics Materials Science Atomic and Molecular Clusters Quantum Physics

Abstract

Molecular conformation in n-alk-1-ynes (CnA) is conventionally simplified to an all-planar structure. We report a comprehensive quantum chemical analysis revealing two near-isoenergetic rotamers at the acetylenic terminus: planar (Cs_s) and skewed (C1_1). The high, symmetric rotational energy barrier (150\approx 150\,meV) arises from unique steric relief near the sp\mathrm{sp} center coupled with electronic stabilization of C1_1. This creates a unique kinetic profile: a Quantum ``Trigger Finger'' (α\alpha rotation) that enforces an 50%:50%\approx 50\%:\,50\% Cs/C1\mathrm{C}_s/\mathrm{C}_1 ensemble, sharply contrasting with the thermodynamically biased ``Stiff Joint'' (δ\delta rotation) of the alkyl chain. This structural degeneracy necessitates ensemble averaging for spectroscopic data interpretation, while the slow interconversion permits kinetic trapping and intentional conformer enrichment during synthesis and molecular junction fabrication. Our work redefines the alkyne anchor, providing a blueprint for accurate interpretation of spectroscopic data and achieving conformational control in molecular electronics.

Keywords

Cite

@article{arxiv.2511.02470,
  title  = {Unlocking n-alk-1-ynes Conformers: Quantum "Trigger Finger" versus "Stiff Joint" Conformations},
  author = {Ioan Bâldea},
  journal= {arXiv preprint arXiv:2511.02470},
  year   = {2025}
}