English

Unexpected crossover dynamics of single polymer in a corrugated tube

Soft Condensed Matter 2015-06-11 v1

Abstract

We present molecular dynamics study of a generic (coarse-grained) model for single-polymer diffusion confined in a corrugated cylinder. For a narrow tube, i.e., diameter of the cylinder δ<2.3\delta < 2.3, the axial diffusion coefficient DD_{||} scales as DN3/2D_{||} \propto N^{-3/2}, with chain length NN, up to N100N \approx 100 then crosses over to Rouse scaling for the larger NN values. The N3/2N^{-3/2} scaling is due to the large fluctuation of the polymer chain along its fully stretched equilibrium conformation. The stronger scaling, namely N3/2N^{-3/2}, is not observed for an atomistically smooth tube and/or for a cylinder with larger diameter.

Keywords

Cite

@article{arxiv.1209.0255,
  title  = {Unexpected crossover dynamics of single polymer in a corrugated tube},
  author = {A. De Virgiliis and L. Kuban and J. Paturej and D. Mukherji},
  journal= {arXiv preprint arXiv:1209.0255},
  year   = {2015}
}

Comments

10 pages, 3 figures, LaTeX, version accepted by J. Chem. Phys