English

Time-dependent corrections to effective rate and event statistics in Michaelis-Menten kinetics

Quantitative Methods 2010-11-24 v1 Statistical Mechanics Chemical Physics Molecular Networks

Abstract

We generalize the concept of the geometric phase in stochastic kinetics to a noncyclic evolution. Its application is demonstrated on kinetics of the Michaelis-Menten reaction. It is shown that the nonperiodic geometric phase is responsible for the correction to the Michaelis-Menten law when parameters, such as a substrate concentration, are changing with time. We apply these ideas to a model of chemical reactions in a bacterial culture of a growing size, where the geometric correction qualitatively changes the outcome of the reaction kinetics.

Keywords

Cite

@article{arxiv.1001.4212,
  title  = {Time-dependent corrections to effective rate and event statistics in Michaelis-Menten kinetics},
  author = {N. A. Sinitsyn and I. Nemenman},
  journal= {arXiv preprint arXiv:1001.4212},
  year   = {2010}
}

Comments

11 pages