Theta palindromes in theta conjugates
Abstract
A DNA string is a Watson-Crick (WK) palindrome when the complement of its reverse is equal to itself. The Watson-Crick mapping is an involution that is also an antimorphism. -conjugates of a word is a generalisation of conjugates of a word that incorporates the notion of WK-involution . In this paper, we study the distribution of palindromes and Watson-Crick palindromes, also known as -palindromes among both the set of conjugates and -conjugates of a word . We also consider some general properties of the set , i.e., the set of -conjugates of a word , and characterize words such that , i.e., with the maximum number of elements in . We also find the structure of words that have at least one (WK)-palindrome in .
Cite
@article{arxiv.2008.00255,
title = {Theta palindromes in theta conjugates},
author = {Kalpana Mahalingam and Palak Pandoh and Anuran Maity},
journal= {arXiv preprint arXiv:2008.00255},
year = {2021}
}
Comments
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