English

The sequential loss of allelic diversity

Probability 2026-01-14 v1 Populations and Evolution

Abstract

This paper gives a new flavor of what Peter Jagers and his co-authors call `the path to extinction'. In a neutral population with constant size NN, we assume that each individual at time 00 carries a distinct type, or allele. We consider the joint dynamics of these NN alleles, for example the dynamics of their respective frequencies and more plainly the nonincreasing process counting the number of alleles remaining by time tt. We call this process the extinction process. We show that in the Moran model, the extinction process is distributed as the process counting (in backward time) the number of common ancestors to the whole population, also known as the block counting process of the NN-Kingman coalescent. Stimulated by this result, we investigate: (1) whether it extends to an identity between the frequencies of blocks in the Kingman coalescent and the frequencies of alleles in the extinction process, both evaluated at jump times; (2) whether it extends to the general case of Λ\Lambda-Fleming-Viot processes.

Keywords

Cite

@article{arxiv.1801.00683,
  title  = {The sequential loss of allelic diversity},
  author = {Guillaume Achaz and Amaury Lambert and Emmanuel Schertzer},
  journal= {arXiv preprint arXiv:1801.00683},
  year   = {2026}
}

Comments

Submitted to appear in the Festschrift in honor of Peter Jagers