English

Reconstructing fully-resolved trees from triplet cover distances

Combinatorics 2012-09-12 v1 Populations and Evolution

Abstract

It is a classical result that any finite tree with positively weighted edges, and without vertices of degree 2, is uniquely determined by the weighted path distance between each pair of leaves. Moreover, it is possible for a (small) strict subset \cl\cl of leaf pairs to suffice for reconstructing the tree and its edge weights, given just the distances between the leaf pairs in \cl\cl. It is known that any set \cl\cl with this property for a tree in which all interior vertices have degree 3 must form a {\em cover} for TT -- that is, for each interior vertex vv of TT, \cl\cl must contain a pair of leaves from each pair of the three components of TvT-v. Here we provide a partial converse of this result by showing that if a set \cl\cl of leaf pairs forms a cover of a certain type for such a tree TT then TT and its edge weights can be uniquely determined from the distances between the pairs of leaves in \cl\cl. Moreover, there is a polynomial-time algorithm for achieving this reconstruction. The result establishes a special case of a recent question concerning `triplet covers', and is relevant to a problem arising in evolutionary genomics.

Keywords

Cite

@article{arxiv.1209.2391,
  title  = {Reconstructing fully-resolved trees from triplet cover distances},
  author = {Katharina T. Huber and Mike Steel},
  journal= {arXiv preprint arXiv:1209.2391},
  year   = {2012}
}

Comments

10 pages, 2 figures

R2 v1 2026-06-21T22:03:22.283Z