English

Phylogenetic tree constructing algorithms fit for grid computing with SVD

Quantitative Methods 2007-05-23 v1 Populations and Evolution

Abstract

Erikkson showed that singular value decomposition(SVD) of flattenings determined a partition of a phylogenetic tree to be a split. In this paper, based on his work, we develop new statistically consistent algorithms fit for grid computing to construct a phylogenetic tree by computing SVD of flattenings with the small fixed number of rows.

Keywords

Cite

@article{arxiv.q-bio/0611015,
  title  = {Phylogenetic tree constructing algorithms fit for grid computing with SVD},
  author = {Young Rock Kim and Oh-In Kwon and Seong-Hun Paeng and Chun-Jae Park},
  journal= {arXiv preprint arXiv:q-bio/0611015},
  year   = {2007}
}

Comments

14 pages, 7 figures