English

Periodically driven DNA: Theory and simulation

Soft Condensed Matter 2016-03-23 v1 Statistical Mechanics

Abstract

We propose a generic model of driven DNA under the influence of an oscillatory force of amplitude FF and frequency ν\nu and show the existence of a dynamical transition for a chain of finite length. We find that the area of the hysteresis loop, AloopA_{\rm loop}, scales with the same exponents as observed in a recent study based on a much more detailed model. However, towards the true thermodynamic limit, the high-frequency scaling regime extends to lower frequencies for larger chain length LL and the system has only one scaling (Aloopν1F2)A_{\rm loop} \approx \nu^{-1}F^2). Expansion of an analytical expression for AloopA_{\rm loop} obtained for the model system in the low-force regime revealed that there is a new scaling exponent associated with force (Aloopν1F2.5A_{\rm loop} \approx \nu^{-1}F^{2.5}), which has been validated by high-precision numerical calculation. By a combination of analytical and numerical arguments, we also deduce that for large but finite LL, the exponents are robust and independent of temperature and friction coefficient.

Keywords

Cite

@article{arxiv.1601.02179,
  title  = {Periodically driven DNA: Theory and simulation},
  author = {Sanjay Kumar and Ravinder Kumar and Wolfhard Janke},
  journal= {arXiv preprint arXiv:1601.02179},
  year   = {2016}
}

Comments

6 pages, 5 figures Physical Review E (2016) (R) (Accepted)

R2 v1 2026-06-22T12:26:12.235Z