English

Pad\'{e} approximants and exact two-locus sampling distributions

Probability 2012-05-03 v2 Populations and Evolution

Abstract

For population genetics models with recombination, obtaining an exact, analytic sampling distribution has remained a challenging open problem for several decades. Recently, a new perspective based on asymptotic series has been introduced to make progress on this problem. Specifically, closed-form expressions have been derived for the first few terms in an asymptotic expansion of the two-locus sampling distribution when the recombination rate ρ\rho is moderate to large. In this paper, a new computational technique is developed for finding the asymptotic expansion to an arbitrary order. Computation in this new approach can be automated easily. Furthermore, it is proved here that only a finite number of terms in the asymptotic expansion is needed to recover (via the method of Pad\'{e} approximants) the exact two-locus sampling distribution as an analytic function of ρ\rho; this function is exact for all values of ρ[0,)\rho\in[0,\infty). It is also shown that the new computational framework presented here is flexible enough to incorporate natural selection.

Keywords

Cite

@article{arxiv.1107.3897,
  title  = {Pad\'{e} approximants and exact two-locus sampling distributions},
  author = {Paul A. Jenkins and Yun S. Song},
  journal= {arXiv preprint arXiv:1107.3897},
  year   = {2012}
}

Comments

Published in at http://dx.doi.org/10.1214/11-AAP780 the Annals of Applied Probability (http://www.imstat.org/aap/) by the Institute of Mathematical Statistics (http://www.imstat.org)

R2 v1 2026-06-21T18:39:14.529Z