Highly Designable Protein Structures and Inter Monomer Interactions
Soft Condensed Matter
2009-10-30 v1 q-bio
Abstract
By exact computer enumeration and combinatorial methods, we have calculated the designability of proteins in a simple lattice H-P model for the protein folding problem. We show that if the strength of the non-additive part of the interaction potential becomes larger than a critical value, the degree of designability of structures will depend on the parameters of potential. We also show that the existence of a unique ground state is highly sensitive to mutation in certain sites.
Keywords
Cite
@article{arxiv.cond-mat/9710028,
title = {Highly Designable Protein Structures and Inter Monomer Interactions},
author = {M. R. Ejtehadi and N. Hamedani and H. Seyed-Allaei and V. Shahrezaei and M. Yahyanejad},
journal= {arXiv preprint arXiv:cond-mat/9710028},
year = {2009}
}
Comments
14 pages, Latex file, 3 latex and 6 eps figures are included