English

Fluctuation theorems for discrete kinetic models of molecular motors

Statistical Mechanics 2017-04-26 v2 Mathematical Physics math.MP Probability

Abstract

Motivated by discrete kinetic models for non-cooperative molecular motors on periodic tracks, we consider random walks (also not Markov) on quasi one dimensional (1d) lattices, obtained by gluing several copies of a fundamental graph in a linear fashion. We show that, for a suitable class of quasi 1d lattices, the large deviation rate function associated to the position of the walker satisfies a Gallavotti-Cohen symmetry for any choice of the dynamical parameters defining the stochastic walk. This class includes the linear model considered in \cite{LLM1}. We also derive fluctuation theorems for the time-integrated cycle currents and discuss how the matrix approach of \cite{LLM1} can be extended to derive the above Gallavotti-Cohen symmetry for any Markov random walk on Z\mathbb{Z} with periodic jump rates. Finally, we review in the present context some large deviation results of \cite{FS1} and give some specific examples with explicit computations.

Keywords

Cite

@article{arxiv.1701.01721,
  title  = {Fluctuation theorems for discrete kinetic models of molecular motors},
  author = {Alessandra Faggionato and Vittoria Silvestri},
  journal= {arXiv preprint arXiv:1701.01721},
  year   = {2017}
}

Comments

Modified Appendix B, added figure 13, minor modifications. 27 pages, 16 figures