English

Exact solution of a linear molecular motor model driven by two-step fluctuations and subject to protein friction

Statistical Mechanics 2014-10-07 v1 Biological Physics Quantitative Methods

Abstract

We investigate by analytical means the stochastic equations of motion of a linear molecular motor model based on the concept of protein friction. Solving the coupled Langevin equations originally proposed by Mogilner et al. (A. Mogilner et al., Phys. Lett. {\bf 237}, 297 (1998)), and averaging over both the two-step internal conformational fluctuations and the thermal noise, we present explicit, analytical expressions for the average motion and the velocity-force relationship. Our results allow for a direct interpretation of details of this motor model which are not readily accessible from numerical solutions. In particular, we find that the model is able to predict physiologically reasonable values for the load-free motor velocity and the motor mobility.

Keywords

Cite

@article{arxiv.cond-mat/0312364,
  title  = {Exact solution of a linear molecular motor model driven by two-step fluctuations and subject to protein friction},
  author = {Hans C. Fogedby and Ralf Metzler and Axel Svane},
  journal= {arXiv preprint arXiv:cond-mat/0312364},
  year   = {2014}
}

Comments

12 pages revtex, 6 eps-figures