Entropic Barriers, Frustration and Order: Basic Ingredients in Protein Folding
Condensed Matter
2009-10-28 v1 chem-ph
q-bio
Abstract
We solve a model that takes into account entropic barriers, frustration, and the organization of a protein-like molecule. For a chain of size , there is an effective folding transition to an ordered structure. Without frustration, this state is reached in a time that scales as , with . This scaling is limited by the amount of frustration which leads to the dynamical selectivity of proteins: foldable proteins are limited to monomers; and they are stable in {\it one} range of temperatures, independent of size and structure. These predictions explain generic properties of {\it in vivo} proteins.
Cite
@article{arxiv.cond-mat/9512019,
title = {Entropic Barriers, Frustration and Order: Basic Ingredients in Protein Folding},
author = {Carlos J. Camacho},
journal= {arXiv preprint arXiv:cond-mat/9512019},
year = {2009}
}
Comments
4 pages, 4 Figures appended as postscript file