English

Entropic Barriers, Frustration and Order: Basic Ingredients in Protein Folding

Condensed Matter 2009-10-28 v1 chem-ph q-bio

Abstract

We solve a model that takes into account entropic barriers, frustration, and the organization of a protein-like molecule. For a chain of size MM, there is an effective folding transition to an ordered structure. Without frustration, this state is reached in a time that scales as MλM^{\lambda}, with λ3\lambda\simeq 3. This scaling is limited by the amount of frustration which leads to the dynamical selectivity of proteins: foldable proteins are limited to 300\sim 300 monomers; and they are stable in {\it one} range of temperatures, independent of size and structure. These predictions explain generic properties of {\it in vivo} proteins.

Keywords

Cite

@article{arxiv.cond-mat/9512019,
  title  = {Entropic Barriers, Frustration and Order: Basic Ingredients in Protein Folding},
  author = {Carlos J. Camacho},
  journal= {arXiv preprint arXiv:cond-mat/9512019},
  year   = {2009}
}

Comments

4 pages, 4 Figures appended as postscript file

R2 v1 2026-07-22T11:51:29.245Z