English

Dependence of DNA persistence length on ionic strength of solutions with monovalent and divalent salts: a joint theory-experiment study

Biological Physics 2016-04-20 v1 Soft Condensed Matter Biomolecules

Abstract

Using high-throughput Tethered Particle Motion single molecule experiments, the double-stranded DNA persistence length, LpL_p, is measured in solutions with Na+^+ and Mg2+^{2+} ions of various ionic strengths, II. Several theoretical equations for Lp(I)L_p(I) are fitted to the experimental data, but no decisive theory is found which fits all the LpL_p values for the two ion valencies. Properly extracted from the particle trajectory using simulations, LpL_p varies from 30~nm to 55~nm, and is compared to previous experimental results. For the Na+^+ only case, LpL_p is an increasing concave function of I1I^{-1}, well fitted by Manning's electrostatic stretching approach, but not by classical Odjik-Skolnick-Fixman theories with or without counter-ion condensation. With added Mg2+^{2+} ions, LpL_p shows a marked decrease at low II, interpreted as an ion-ion correlation effect, with an almost linear law in I1I^{-1}, fitted by a proposed variational approach.

Keywords

Cite

@article{arxiv.1504.02666,
  title  = {Dependence of DNA persistence length on ionic strength of solutions with monovalent and divalent salts: a joint theory-experiment study},
  author = {Annaël Brunet and Catherine Tardin and Laurence Salomé and Philippe Rousseau and Nicolas Destainville and Manoel Manghi},
  journal= {arXiv preprint arXiv:1504.02666},
  year   = {2016}
}