Cyclization of a Polymer: A First Passage Problem for a Non-Markovian Process
Soft Condensed Matter
2009-11-07 v2 Statistical Mechanics
Abstract
We discuss a problem of cyclization of a polymer molecule, which is an important example of reaction in a system showing strongly non-Markovian behavior on the timescales of interest. We show that the knowledge of the joint three-time probability distribution of the end-to-end distance is sufficient for the full description of the cyclization kinetics, so that the survival probability follows rigorously as a solution of the Volterra integral equation. The corresponding kinetics can easily be evaluated numerically. We moreover discuss how do some well-known approximations appear from this exact scheme due to decoupling.
Cite
@article{arxiv.cond-mat/0207159,
title = {Cyclization of a Polymer: A First Passage Problem for a Non-Markovian Process},
author = {I. M. Sokolov},
journal= {arXiv preprint arXiv:cond-mat/0207159},
year = {2009}
}
Comments
Several typos are corrected