English

Cyclization of a Polymer: A First Passage Problem for a Non-Markovian Process

Soft Condensed Matter 2009-11-07 v2 Statistical Mechanics

Abstract

We discuss a problem of cyclization of a polymer molecule, which is an important example of reaction in a system showing strongly non-Markovian behavior on the timescales of interest. We show that the knowledge of the joint three-time probability distribution of the end-to-end distance is sufficient for the full description of the cyclization kinetics, so that the survival probability follows rigorously as a solution of the Volterra integral equation. The corresponding kinetics can easily be evaluated numerically. We moreover discuss how do some well-known approximations appear from this exact scheme due to decoupling.

Keywords

Cite

@article{arxiv.cond-mat/0207159,
  title  = {Cyclization of a Polymer: A First Passage Problem for a Non-Markovian Process},
  author = {I. M. Sokolov},
  journal= {arXiv preprint arXiv:cond-mat/0207159},
  year   = {2009}
}

Comments

Several typos are corrected

R2 v1 2026-07-22T10:38:49.745Z