English

Concentration Robustness in LP Kinetic Systems

Algebraic Geometry 2021-10-27 v1

Abstract

For a reaction network with species set S\mathscr{S}, a log-parametrized (LP) set is a non-empty set of the form E(P,x)={xR>SlogxlogxP}E(P, x^*) = \{x \in \mathbb{R}^\mathscr{S}_> \mid \log x - \log x^* \in P^\perp\} where PP (called the LP set's flux subspace) is a subspace of RS\mathbb{R}^\mathscr{S}, xx^* (called the LP set's reference point) is a given element of R>S\mathbb{R}^\mathscr{S}_>, and PP^\perp (called the LP set's parameter subspace) is the orthogonal complement of PP. A network with kinetics KK is a positive equilibria LP (PLP) system if its set of positive equilibria is an LP set. Analogously, it is a complex balanced equilibria LP (CLP) system if its set of complex balanced equilibria is an LP set. An LP kinetic system is a PLP or CLP system. This paper studies concentration robustness of a species on subsets of equilibria. We present the "species hyperplane criterion", a necessary and sufficient condition for absolute concentration robustness (ACR) for a species of a PLP system. An analogous criterion holds for balanced concentration robustness (BCR) for species of a CLP system. These criteria also lead to interesting necessary properties of LP systems with concentration robustness. Furthermore, we show that PLP and CLP power law systems with Shinar-Feinberg reaction pairs in species XX in a linkage class have ACR and BCR in XX, respectively. This leads to a broadening of the "low deficiency building blocks" framework to include LP systems of Shinar-Feinberg type with arbitrary deficiency. Finally, we apply our results to species concentration robustness in LP systems with poly-PL kinetics.

Cite

@article{arxiv.2110.13845,
  title  = {Concentration Robustness in LP Kinetic Systems},
  author = {Angelyn R. Lao and Patrick Vincent N. Lubenia and Daryl M. Magpantay and Eduardo R. Mendoza},
  journal= {arXiv preprint arXiv:2110.13845},
  year   = {2021}
}

Comments

31 pages, 0 figure

R2 v1 2026-06-24T07:12:26.047Z