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Clifford Group Equivariant Diffusion Models for 3D Molecular Generation

Machine Learning 2025-04-25 v2 Artificial Intelligence

Abstract

This paper explores leveraging the Clifford algebra's expressive power for \E(n)\E(n)-equivariant diffusion models. We utilize the geometric products between Clifford multivectors and the rich geometric information encoded in Clifford subspaces in \emph{Clifford Diffusion Models} (CDMs). We extend the diffusion process beyond just Clifford one-vectors to incorporate all higher-grade multivector subspaces. The data is embedded in grade-kk subspaces, allowing us to apply latent diffusion across complete multivectors. This enables CDMs to capture the joint distribution across different subspaces of the algebra, incorporating richer geometric information through higher-order features. We provide empirical results for unconditional molecular generation on the QM9 dataset, showing that CDMs provide a promising avenue for generative modeling.

Cite

@article{arxiv.2504.15773,
  title  = {Clifford Group Equivariant Diffusion Models for 3D Molecular Generation},
  author = {Cong Liu and Sharvaree Vadgama and David Ruhe and Erik Bekkers and Patrick Forré},
  journal= {arXiv preprint arXiv:2504.15773},
  year   = {2025}
}

Comments

7 pages, 1 figure, 1 table

R2 v1 2026-06-28T23:07:02.531Z