English

Bayesian nonparametric inference for discovery probabilities: credible intervals and large sample asymptotics

Methodology 2017-10-18 v2 Statistics Theory Statistics Theory

Abstract

Given a sample of size nn from a population of individuals belonging to different species with unknown proportions, a popular problem of practical interest consists in making inference on the probability Dn(l)D_{n}(l) that the (n+1)(n+1)-th draw coincides with a species with frequency ll in the sample, for any l=0,1,,nl=0,1,\ldots,n. This paper contributes to the methodology of Bayesian nonparametric inference for Dn(l)D_{n}(l). Specifically, under the general framework of Gibbs-type priors we show how to derive credible intervals for a Bayesian nonparametric estimation of Dn(l)D_{n}(l), and we investigate the large nn asymptotic behaviour of such an estimator. Of particular interest are special cases of our results obtained under the specification of the two parameter Poisson--Dirichlet prior and the normalized generalized Gamma prior, which are two of the most commonly used Gibbs-type priors. With respect to these two prior specifications, the proposed results are illustrated through a simulation study and a benchmark Expressed Sequence Tags dataset. To the best our knowledge, this illustration provides the first comparative study between the two parameter Poisson--Dirichlet prior and the normalized generalized Gamma prior in the context of Bayesian nonparemetric inference for Dn(l)D_{n}(l).

Keywords

Cite

@article{arxiv.1506.04915,
  title  = {Bayesian nonparametric inference for discovery probabilities: credible intervals and large sample asymptotics},
  author = {Julyan Arbel and Stefano Favaro and Bernardo Nipoti and Yee Whye Teh},
  journal= {arXiv preprint arXiv:1506.04915},
  year   = {2017}
}
R2 v1 2026-06-22T09:54:25.397Z