We study transport properties of a topological insulator nanowire when a magnetic field is applied along its length. We predict that with strong surface disorder, a characteristic signature of the band topology is revealed in Aharonov Bohm (AB) oscillations of the conductance. These oscillations have a component with anomalous period Φ0=hc/e, and with conductance maxima at odd multiples of 21Φ0, i.e. when the AB phase for surface electrons is π. This is intimately connected to the band topology and a surface curvature induced Berry phase, special to topological insulator surfaces. We discuss similarities and differences from recent experiments on Bi2Se3 nanoribbons, and optimal conditions for observing this effect.