An Algorithm for Alignment-free Sequence Comparison using Logical Match
Computational Engineering, Finance, and Science
2014-07-09 v1 Quantitative Methods
Abstract
This paper proposes an algorithm for alignment-free sequence comparison using Logical Match. Here, we compute the score using fuzzy membership values which generate automatically from the number of matches and mismatches. We demonstrate the method with both the artificial and real datum. The results show the uniqueness of the proposed method by analyzing DNA sequences taken from NCBI databank with a novel computational time.
Cite
@article{arxiv.1407.2237,
title = {An Algorithm for Alignment-free Sequence Comparison using Logical Match},
author = {Sanil Shanker KP and Elizabeth Sherly and Jim Austin},
journal= {arXiv preprint arXiv:1407.2237},
year = {2014}
}
Comments
Computer and Automation Engineering (ICCAE), 2010 The 2nd International Conference on