English

The time is ripe to reverse engineer an entire nervous system: simulating behavior from neural interactions

Neurons and Cognition 2024-09-20 v5

Abstract

Just like electrical engineers understand how microprocessors execute programs in terms of how transistor currents are affected by their inputs, neuroscientists want to understand behavior production in terms of how neuronal outputs are affected by their inputs and internal states. This dependency of neuronal outputs on inputs can be described by a state-dependent input-output (IO)-function. However, to reliably identify these IO-functions, we need to perturb each input and combinations of inputs while observing all the outputs. Here, we argue that such completeness is possible in C. elegans; a complete description that goes all the way from the activity of every neuron to predict behavior. The established and growing toolkit of optophysiology can non-invasively capture and control every neuron's activity and scale to countless experiments. The information from many such experiments can be pooled while capturing the inter-individual variability because neuronal identity and function are largely conserved across individuals. Just like electrical engineers use transistor IO-functions to simulate program execution, we argue that neuronal IO-functions could be used to simulate the impressive breadth of brain states and behaviors of C. elegans.

Keywords

Cite

@article{arxiv.2308.06578,
  title  = {The time is ripe to reverse engineer an entire nervous system: simulating behavior from neural interactions},
  author = {Gal Haspel and Ben Baker and Isabel Beets and Edward S Boyden and Jeffrey Brown and George Church and Netta Cohen and Daniel Colon-Ramos and Eva Dyer and Christopher Fang-Yen and Steven Flavell and Miriam B Goodman and Anne C Hart and Eduardo J Izquierdo and Konstantinos Kagias and Shawn Lockery and Yangning Lu and Adam Marblestone and Jordan Matelsky and Brett Mensh and Talmo D Pereira and Hanspeter Pfister and Kanaka Rajan and Horacio G Rotstein and Monika Scholz and Joshua W. Shaevitz and Eli Shlizerman and Quilee Simeon and Michael A Skuhersky and Vineet Tiruvadi and Vivek Venkatachalam and Donglai Wei and Brock Wester and Guangyu Robert Yang and Eviatar Yemini and Manuel Zimmer and Konrad P Kording},
  journal= {arXiv preprint arXiv:2308.06578},
  year   = {2024}
}

Comments

28 pages, 2 figures, opinion paper

R2 v1 2026-06-28T11:54:19.405Z