English

Pseudo-RNA with parallel aligned single-strands and periodic base sequence as a new universality class

Soft Condensed Matter 2026-04-01 v1 Statistical Mechanics Biological Physics

Abstract

We investigate a field theory for RNA-like polymers with periodic base sequence GCGCG..., where only single-strands aligned in the same direction form double strands. The field theory is derived from a lattice model that incorporates excluded volume effects, base sequence, and temperature dependent renaturation/denaturation. The artificial directionality leads to a novel universality class, not related to conventional branched polymers and Lee-Yang field theory. This universality class is unstable against natural pairing, where oppositely aligned single-strands form double strands. The denaturation/renaturation transition is a continuous crossover between two φn=04\varphi_{n=0}^{4} critical points and the critical point of the new universality class.

Cite

@article{arxiv.2409.10158,
  title  = {Pseudo-RNA with parallel aligned single-strands and periodic base sequence as a new universality class},
  author = {R. Dengler},
  journal= {arXiv preprint arXiv:2409.10158},
  year   = {2026}
}
R2 v1 2026-06-28T18:45:54.436Z