English

LEARNER: Contrastive Pretraining for Learning Fine-Grained Patient Progression from Coarse Inter-Patient Labels

Image and Video Processing 2025-11-21 v2 Artificial Intelligence Computer Vision and Pattern Recognition Machine Learning

Abstract

Predicting whether a treatment leads to meaningful improvement is a central challenge in personalized medicine, particularly when disease progression manifests as subtle visual changes over time. While data-driven deep learning (DL) offers a promising route to automate such predictions, acquiring large-scale longitudinal data for each individual patient remains impractical. To address this limitation, we explore whether inter-patient variability can serve as a proxy for learning intra-patient progression. We propose LEARNER, a contrastive pretraining framework that leverages coarsely labeled inter-patient data to learn fine-grained, patient-specific representations. Using lung ultrasound (LUS) and brain MRI datasets, we demonstrate that contrastive objectives trained on coarse inter-patient differences enable models to capture subtle intra-patient changes associated with treatment response. Across both modalities, our approach improves downstream classification accuracy and F1-score compared to standard MSE pretraining, highlighting the potential of inter-patient contrastive learning for individualized outcome prediction.

Keywords

Cite

@article{arxiv.2411.01144,
  title  = {LEARNER: Contrastive Pretraining for Learning Fine-Grained Patient Progression from Coarse Inter-Patient Labels},
  author = {Jana Armouti and Nikhil Madaan and Rohan Panda and Tom Fox and Laura Hutchins and Amita Krishnan and Ricardo Rodriguez and Bennett DeBoisblanc and Deva Ramanan and John Galeotti and Gautam Gare},
  journal= {arXiv preprint arXiv:2411.01144},
  year   = {2025}
}

Comments

Under review at ISBI 2026 conference

R2 v1 2026-06-28T19:45:19.067Z