English

Graph Partitioning and Graph Neural Network based Hierarchical Graph Matching for Graph Similarity Computation

Machine Learning 2021-01-06 v3 Social and Information Networks Machine Learning

Abstract

Graph similarity computation aims to predict a similarity score between one pair of graphs to facilitate downstream applications, such as finding the most similar chemical compounds similar to a query compound or Fewshot 3D Action Recognition. Recently, some graph similarity computation models based on neural networks have been proposed, which are either based on graph-level interaction or node-level comparison. However, when the number of nodes in the graph increases, it will inevitably bring about reduced representation ability or high computation cost. Motivated by this observation, we propose a graph partitioning and graph neural network-based model, called PSimGNN, to effectively resolve this issue. Specifically, each of the input graphs is partitioned into a set of subgraphs to extract the local structural features directly. Next, a novel graph neural network with an attention mechanism is designed to map each subgraph into an embedding vector. Some of these subgraph pairs are automatically selected for node-level comparison to supplement the subgraph-level embedding with fine-grained information. Finally, coarse-grained interaction information among subgraphs and fine-grained comparison information among nodes in different subgraphs are integrated to predict the final similarity score. Experimental results on graph datasets with different graph sizes demonstrate that PSimGNN outperforms state-of-the-art methods in graph similarity computation tasks using approximate Graph Edit Distance (GED) as the graph similarity metric.

Keywords

Cite

@article{arxiv.2005.08008,
  title  = {Graph Partitioning and Graph Neural Network based Hierarchical Graph Matching for Graph Similarity Computation},
  author = {Haoyan Xu and Ziheng Duan and Jie Feng and Runjian Chen and Qianru Zhang and Zhongbin Xu and Yueyang Wang},
  journal= {arXiv preprint arXiv:2005.08008},
  year   = {2021}
}
R2 v1 2026-06-23T15:35:37.577Z