Since the advent of X-ray and EUV spectroscopy, the discovery of the First Ionization Potential (FIP) effect--where coronal elemental compositions diverge from their photospheric values based on the element's FIP--has remained a key puzzle in solar and stellar astrophysics. These deviations exhibit significant fluctuations during flares, yet their connection to plasma dynamics has remained unclear. Here, we report a clear correlation between temperature-sensitive flaring plasma emission and element-specific abundance changes for a solar flare. These findings indicate that energy deposition in the chromosphere drives plasma evaporation from different chromospheric heights, modulating elemental abundances. Hydrodynamic simulations support these observations, showing that varying energy deposition magnitudes generate plasma upflows from different chromospheric heights, leading to element-specific FIP fractionation. These results provide new insights into the dynamic coupling of flare energy, plasma flows, and abundance variability, with implications for understanding coupling between different atmospheric layers.