We introduce an improved version of RECKONER, an error corrector for Illumina whole genome sequencing data. By modifying its workflow we reduce the computation time even 10 times. We also propose a new method of determination of k-mer length, the key parameter of k-spectrum-based family of correctors. The correction algorithms are examined on huge data sets, i.e., human and maize genomes for both Illumina HiSeq and MiSeq instruments.
@article{arxiv.1703.00690,
title = {Even better correction of genome sequencing data},
author = {Maciej Dlugosz and Sebastian Deorowicz and Marek Kokot},
journal= {arXiv preprint arXiv:1703.00690},
year = {2017}
}