English

Diversity in immunogenomics: the value and the challenge

Genomics 2021-03-03 v4

Abstract

With the advent of high-throughput sequencing technologies, the fields of immunogenomics and adaptive immune receptor repertoire research are facing both opportunities and challenges. Adaptive immune receptor repertoire sequencing (AIRR-seq) has become an increasingly important tool to characterize T and B cell responses in settings of interest. However, the majority of AIRR-seq studies conducted so far were performed in individuals of European ancestry, restricting the ability to identify variation in human adaptive immune responses across populations and limiting their applications. As AIRR-seq studies depend on the ability to assign VDJ sequence reads to the correct germline gene segments, efforts to characterize the genomic loci that encode adaptive immune receptor genes in different populations are urgently needed. The availability of comprehensive germline gene databases and further applications of AIRR-seq studies to individuals of non-European ancestry will substantially enhance our understanding of human adaptive immune responses, promote the development of effective diagnostics and treatments, and eventually advance precision medicine.

Keywords

Cite

@article{arxiv.2010.10402,
  title  = {Diversity in immunogenomics: the value and the challenge},
  author = {Kerui Peng and Yana Safonova and Mikhail Shugay and Alice Popejoy and Oscar Rodriguez and Felix Breden and Petter Brodin and Amanda M. Burkhardt and Carlos Bustamante and Van-Mai Cao-Lormeau and Martin M. Corcoran and Darragh Duffy and Macarena Fuentes Guajardo and Ricardo Fujita and Victor Greiff and Vanessa D. Jonsson and Xiao Liu and Lluis Quintana-Murci and Maura Rossetti and Jianming Xie and Gur Yaari and Wei Zhang and Malak S. Abedalthagafi and Khalid O. Adekoya and Rahaman A. Ahmed and Wei-Chiao Chang and Clive Gray and Yusuke Nakamura and William D. Lees and Purvesh Khatri and Houda Alachkar and Cathrine Scheepers and Corey T. Watson and Gunilla B. Karlsson Hedestam and Serghei Mangul},
  journal= {arXiv preprint arXiv:2010.10402},
  year   = {2021}
}

Comments

22 pages,1 table

R2 v1 2026-06-23T19:29:39.465Z