English

Critical population and error threshold on the sharp peak landscape for the Wright-Fisher model

Probability 2016-08-14 v2 Populations and Evolution

Abstract

We pursue the task of developing a finite population counterpart to Eigen's model. We consider the classical Wright-Fisher model describing the evolution of a population of size mm of chromosomes of length \ell over an alphabet of cardinality κ\kappa. The mutation probability per locus is qq. The replication rate is σ>1\sigma>1 for the master sequence and 11 for the other sequences. We study the equilibrium distribution of the process in the regime where +\ell\to+\infty, m+m\to+\infty, q0q\to0, qa]0,+[\ell q\to a\in\,]0,+\infty[, mα[0,+]\frac{m}{\ell}\to\alpha\in [0,+\infty]. We obtain an equation αψ(a)=lnκ\alpha\psi(a)=\ln\kappa in the parameter space (a,α)(a,\alpha) separating the regime where the equilibrium population is totally random from the regime where a quasispecies is formed. We observe the existence of a critical population size necessary for a quasispecies to emerge, and we recover the finite population counterpart of the error threshold. The result is the twin brother of the corresponding result for the Moran model. The proof is more complex, and it relies on the Freidlin-Wentzell theory of random perturbations of dynamical systems.

Keywords

Cite

@article{arxiv.1207.0673,
  title  = {Critical population and error threshold on the sharp peak landscape for the Wright-Fisher model},
  author = {Raphaël Cerf},
  journal= {arXiv preprint arXiv:1207.0673},
  year   = {2016}
}

Comments

Published at http://dx.doi.org/10.1214/14-AAP1039 in the Annals of Applied Probability (http://www.imstat.org/aap/) by the Institute of Mathematical Statistics (http://www.imstat.org). arXiv admin note: text overlap with arXiv:1205.3435

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