English

Balanced Vertices in Trees and a Simpler Algorithm to Compute the Genomic Distance

Discrete Mathematics 2021-01-01 v1 Combinatorics

Abstract

This paper provides a short and transparent solution for the covering cost of white-grey trees which play a crucial role in the algorithm of Bergeron {\it et al.}\ to compute the rearrangement distance between two multichromosomal genomes in linear time ({\it Theor. Comput. Sci.}, 410:5300-5316, 2009). In the process it introduces a new {\em center} notion for trees, which seems to be interesting on its own.

Keywords

Cite

@article{arxiv.1004.2735,
  title  = {Balanced Vertices in Trees and a Simpler Algorithm to Compute the Genomic Distance},
  author = {Péter L. Erdős and Lajos Soukup and Jens Stoye},
  journal= {arXiv preprint arXiv:1004.2735},
  year   = {2021}
}

Comments

6 pages, submitted

R2 v1 2026-06-21T15:10:58.657Z