Application of a Semi-automatic Algorithm for Identification of Molecular Components in SBML Models
Computational Engineering, Finance, and Science
2013-10-01 v1 Molecular Networks
Abstract
Reactions forming a pathway can be rewritten by making explicit the different molecular components involved in them. A molecular component represents a biological entity (e.g. a protein) in all its states (free, bound, degraded, etc.). In this paper we show the application of a component identification algorithm to a number of real-world models to experimentally validate the approach. Components identification allows subpathways to be computed to better understand the pathway functioning.
Keywords
Cite
@article{arxiv.1309.7689,
title = {Application of a Semi-automatic Algorithm for Identification of Molecular Components in SBML Models},
author = {Andrea Maggiolo-Schettini and Paolo Milazzo and Giovanni Pardini},
journal= {arXiv preprint arXiv:1309.7689},
year = {2013}
}
Comments
In Proceedings Wivace 2013, arXiv:1309.7122