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We discuss results that have been obtained from the implementation of the initial round of testbeds for numerical relativity which was proposed in the first paper of the Apples with Apples Alliance. We present benchmark results for various…

General Relativity and Quantum Cosmology · Physics 2008-11-26 M. C. Babiuc , S. Husa , D. Alic , I. Hinder , C. Lechner , E. Schnetter , B. Szilagyi , Y. Zlochower , N. Dorband , D. Pollney , J. Winicour

One of the main goals of mathematical modeling in systems medicine related to medical applications is to obtain patient-specific parameterizations and model predictions. In clinical practice, however, the number of available measurements…

Methodology · Statistics 2017-06-22 Ilja Klebanov , Alexander Sikorski , Christof Schütte , Susanna Röblitz

Research in natural language processing proceeds, in part, by demonstrating that new models achieve superior performance (e.g., accuracy) on held-out test data, compared to previous results. In this paper, we demonstrate that test-set…

Machine Learning · Computer Science 2019-09-09 Jesse Dodge , Suchin Gururangan , Dallas Card , Roy Schwartz , Noah A. Smith

We study random points on the real line generated by the eigenvalues in unitary invariant random matrix ensembles or by more general repulsive particle systems. As the number of points tends to infinity, we prove convergence of the…

Probability · Mathematics 2015-11-11 Kristina Schubert , Martin Venker

The successful application of machine learning (ML) methods becomes increasingly dependent on their interpretability or explainability. Designing explainable ML systems is instrumental to ensuring transparency of automated decision-making…

Machine Learning · Computer Science 2022-07-04 L. Zhang , G. Karakasidis , A. Odnoblyudova , L. Dogruel , A. Jung

Systems biology and whole-cell modelling are demanding increasingly comprehensive mathematical models of cellular biochemistry. These models require the development of simplified models of specific processes which capture essential…

Quantitative Methods · Quantitative Biology 2020-08-03 Peter J. Gawthrop , Peter Cudmore , Edmund J. Crampin

Many pre-trained models (PTMs) are available in modern applications. Because different PTMs are often trained on different datasets, their performances can vary substantially for different new tasks, and the ranking of the candidates may…

Methodology · Statistics 2026-05-14 Ziwen Gao , Baihua He , Yuhong Yang

We propose a principled framework for nonparametric empirical Bayes (EB) estimation, based on the idea that the prior should be consistent with the observed posterior and that Bayesian updating should be stable. Focusing on discretized…

Methodology · Statistics 2025-07-14 Valentino Dardanoni , Stefano Demichelis

This paper follows previous research we have already performed in the area of Bayesian networks models for CAT. We present models using Item Response Theory (IRT - standard CAT method), Bayesian networks, and neural networks. We conducted…

Artificial Intelligence · Computer Science 2016-02-02 Martin Plajner , Jiří Vomlel

In this lecture we shall summarize the scientific legacy of LEP, in particular in connection with the Standard Model of Particle Physics; we shall also discuss some historical and sociological aspects of the experimentation at LEP.

High Energy Physics - Experiment · Physics 2017-08-23 Giorgio Giacomelli , Roberto Giacomelli

The article considers parameter estimation constructing such as quasi-maximum likelyhood estimation and one step estimation in statistical models generated by solution of stochastic differential equation. It has been developed a software…

Statistics Theory · Mathematics 2021-03-12 Dmytro Ivanenko , Rostyslav Pogorielov

We study asymptotic properties of expectation propagation (EP) -- a method for approximate inference originally developed in the field of machine learning. Applied to generalized linear models, EP iteratively computes a multivariate…

Information Theory · Computer Science 2018-05-11 Burak Çakmak , Manfred Opper

Bayesian inference is a popular method to build learning algorithms but it is hampered by the fact that its key object, the posterior probability distribution, is often uncomputable. Expectation Propagation (EP) (Minka (2001)) is a popular…

Machine Learning · Statistics 2016-12-16 Guillaume P. Dehaene

Pattern learning in an important problem in Natural Language Processing (NLP). Some exhaustive pattern learning (EPL) methods (Bod, 1992) were proved to be flawed (Johnson, 2002), while similar algorithms (Och and Ney, 2004) showed great…

Artificial Intelligence · Computer Science 2011-04-21 Libin Shen

Radiative transfer effects need to be taken into account when analysing spectral line observations. When the data are not sufficient for detailed modelling, simpler methods are needed. The escape probability formalism (EPF) is one such…

Instrumentation and Methods for Astrophysics · Physics 2025-04-16 Mika Juvela

In the following article we consider approximate Bayesian computation (ABC) for certain classes of time series models. In particular, we focus upon scenarios where the likelihoods of the observations and parameter are intractable, by which…

Computation · Statistics 2014-01-03 Ajay Jasra

When a mathematical or computational model is used to analyse some system, it is usual that some parameters resp.\ functions or fields in the model are not known, and hence uncertain. These parametric quantities are then identified by…

Probability · Mathematics 2016-07-01 Hermann G. Matthies , Elmar Zander , Bojana Rosic , Alexander Litvinenko

Most existing evaluations of explainable machine learning (ML) methods rely on simplifying assumptions or proxies that do not reflect real-world use cases; the handful of more robust evaluations on real-world settings have shortcomings in…

This paper presents a comprehensive survey of various established mathematical models pertaining to Somitogenesis, a biological process. The study begins by revisiting and replicating the findings from prominent research papers in this…

Dynamical Systems · Mathematics 2023-10-09 Hanyu Song

We propose PALPS, a Process Algebra with Locations for Population Systems. PALPS allows us to produce spatially-explicit, individual-based models and to reason about their behavior. Our calculus has two levels: at the first level we may…

Logic in Computer Science · Computer Science 2012-11-20 Margarita Antonaki , Anna Philippou