Related papers: Testing Quantum Dynamics in Genetic Information Pr…
Genetic algorithms are heuristic optimization techniques inspired by Darwinian evolution. Quantum computation is a new computational paradigm which exploits quantum resources to speed up information processing tasks. Therefore, it is…
Molecular biology explains function of molecules by their geometrical and electronical structures that are mainly determined by utilization of quantum effects in chemistry. However, further quantum effects are not thought to play any…
We discuss the usefulness of quantum cloning and present examples of quantum computation tasks for which cloning offers an advantage which cannot be matched by any approach that does not resort to it. In these quantum computations, we need…
We discuss a general method of model selection from experimentally recorded time-trace data. This method can be used to distinguish between quantum and classical dynamical models. It can be used in post-selection as well as for real-time…
The formation of DNA loops by proteins and protein complexes is ubiquitous to many fundamental cellular processes, including transcription, recombination, and replication. Here we review recent advances in understanding the properties of…
Quantum particles and classical particles are described in a common setting of classical statistical physics. The property of a particle being "classical" or "quantum" ceases to be a basic conceptual difference. The dynamics differs,…
We investigate quantum effects in the evolution of general systems. For studying such temporal quantum phenomena, it is paramount to have a rigorous concept and profound understanding of the classical dynamics in such a system in the first…
We consider a physical system in which the description of states and measurements follow the usual quantum mechanical rules. We also assume that the dynamics is linear, but may not be fully quantum (i.e unitary). We show that in such a…
We present a calculation technique for modeling inhomogeneous DNA replication kinetics, where replication factors such as initiation rates or fork speeds can change with both position and time. We can use our model to simulate data sets…
Experiments that look for nonlinear quantum dynamics test the fundamental premise of physics that one of two separate systems can influence the physical behavior of the other only if there is a force between them, an interaction that…
DNA sequencing allows for the determination of the genetic code of an organism, and therefore is an indispensable tool that has applications in Medicine, Life Sciences, Evolutionary Biology, Food Sciences and Technology, and Agriculture. In…
Random walks are fundamental models of stochastic processes with applications in various fields including physics, biology, and computer science. We study classical and quantum random walks under the influence of stochastic resetting on…
DNA looping plays a fundamental role in a wide variety of biological processes, providing the backbone for long range interactions on DNA. Here we develop the first model for DNA looping by an arbitrarily large number of proteins and solve…
Software under test can be analyzed dynamically, while it is being executed, to find defects. However, as the number and possible values of input parameters increase, the cost of dynamic testing rises. This paper examines whether quantum…
Quantum state discrimination underlies various applications in quantum information processing tasks. It essentially describes the distinguishability of quantum systems in different states, and the general process of extracting classical…
Quantum dynamics can be regarded as a generalization of classical finite-state dynamics. This is a familiar viewpoint for workers in quantum computation, which encompasses classical computation as a special case. Here this viewpoint is…
The incorporation of quantum ansatz with machine learning classification models demonstrates the ability to extract patterns from data for classification tasks. However, taking advantage of the enhanced computational power of quantum…
Recent years have seen significant activity on the problem of using data for the purpose of learning properties of quantum systems or of processing classical or quantum data via quantum computing. As in classical learning, quantum learning…
The area of property testing tries to design algorithms that can efficiently handle very large amounts of data: given a large object that either has a certain property or is somehow "far" from having that property, a tester should…
A fundamental problem in statistics and learning theory is to test properties of distributions. We show that quantum computers can solve such problems with significant speed-ups. In particular, we give fast quantum algorithms for testing…