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Networks are ubiquitous in biology and computational approaches have been largely investigated for their inference. In particular, supervised machine learning methods can be used to complete a partially known network by integrating various…

Machine Learning · Computer Science 2014-04-25 Marie Schrynemackers , Louis Wehenkel , M. Madan Babu , Pierre Geurts

Asymmetric data naturally exist in real life, such as directed graphs. Different from the common kernel methods requiring Mercer kernels, this paper tackles the asymmetric kernel-based learning problem. We describe a nonlinear extension of…

Machine Learning · Computer Science 2023-06-13 Qinghua Tao , Francesco Tonin , Panagiotis Patrinos , Johan A. K. Suykens

Support Vector Machines, SVMs, and the Large Margin Nearest Neighbor algorithm, LMNN, are two very popular learning algorithms with quite different learning biases. In this paper we bring them into a unified view and show that they have a…

Machine Learning · Computer Science 2012-01-24 Huyen Do , Alexandros Kalousis , Jun Wang , Adam Woznica

We introduce the loss kernel, an interpretability method for measuring similarity between data points according to a trained neural network. The kernel is the covariance matrix of per-sample losses computed under a distribution of…

Machine Learning · Computer Science 2025-10-01 Maxwell Adam , Zach Furman , Jesse Hoogland

Support vector machines and kernel methods have recently gained considerable attention in chemoinformatics. They offer generally good performance for problems of supervised classification or regression, and provide a flexible and…

Quantitative Methods · Quantitative Biology 2007-08-02 Pierre Mahé , Jean-Philippe Vert

Kernel methods have been successfully applied to the areas of pattern recognition and data mining. In this paper, we mainly discuss the issue of propagating labels in kernel space. A Kernel-Induced Label Propagation (Kernel-LP) framework by…

Computer Vision and Pattern Recognition · Computer Science 2019-06-03 Zhao Zhang , Lei Jia , Mingbo Zhao , Guangcan Liu , Meng Wang , Shuicheng Yan

Multi-view learning (MVL) is an emerging field in machine learning that focuses on improving generalization performance by leveraging complementary information from multiple perspectives or views. Various multi-view support vector machine…

Machine Learning · Computer Science 2025-12-19 A. Quadir , M. Sajid , Mushir Akhtar , M. Tanveer

We introduce two kernels that extend the mean map, which embeds probability measures in Hilbert spaces. The generative mean map kernel (GMMK) is a smooth similarity measure between probabilistic models. The latent mean map kernel (LMMK)…

Machine Learning · Computer Science 2010-05-04 Nishant A. Mehta , Alexander G. Gray

In order to identify one system (module) in an interconnected dynamic network, one typically has to solve a Multi-Input-Single-Output (MISO) identification problem that requires identification of all modules in the MISO setup. For…

Systems and Control · Electrical Eng. & Systems 2021-01-27 Karthik R. Ramaswamy , Giulio Bottegal , Paul M. J. Van den Hof

Standard convolutions are prevalent in image processing and deep learning, but their fixed kernels limits adaptability. Several deformation strategies of the reference kernel grid have been proposed. Yet, they lack a unified theoretical…

Computer Vision and Pattern Recognition · Computer Science 2025-07-31 Thomas Dagès , Michael Lindenbaum , Alfred M. Bruckstein

Matrix approximations are a key element in large-scale algebraic machine learning approaches. The recently proposed method MEKA (Si et al., 2014) effectively employs two common assumptions in Hilbert spaces: the low-rank property of an…

Machine Learning · Computer Science 2022-01-21 Simon Heilig , Maximilian Münch , Frank-Michael Schleif

Starting with a similarity function between objects, it is possible to define a distance metric on pairs of objects, and more generally on probability distributions over them. These distance metrics have a deep basis in functional analysis,…

Computational Geometry · Computer Science 2011-03-15 Sarang Joshi , Raj Varma Kommaraju , Jeff M. Phillips , Suresh Venkatasubramanian

A recent paper (Neural Networks, {\bf 132} (2020), 253-268) introduces a straightforward and simple kernel based approximation for manifold learning that does not require the knowledge of anything about the manifold, except for its…

Machine Learning · Computer Science 2022-04-22 Eric Mason , Hrushikesh Mhaskar , Adam Guo

In this work we consider the problem of learning a positive semidefinite kernel matrix from relative comparisons of the form: "object A is more similar to object B than it is to C", where comparisons are given by humans. Existing solutions…

Machine Learning · Computer Science 2014-04-17 Eric Heim , Hamed Valizadegan , Milos Hauskrecht

Conditional Maximum Mean Discrepancy (CMMD) can capture the discrepancy between conditional distributions by drawing support from nonlinear kernel functions, thus it has been successfully used for pattern classification. However, CMMD does…

Computer Vision and Pattern Recognition · Computer Science 2020-08-25 Chuan-Xian Ren , Pengfei Ge , Dao-Qing Dai , Hong Yan

Deep kernel learning provides an elegant and principled framework for combining the structural properties of deep learning algorithms with the flexibility of kernel methods. By means of a deep neural network, we learn a parametrized kernel…

Machine Learning · Computer Science 2020-12-14 Prudencio Tossou , Basile Dura , Francois Laviolette , Mario Marchand , Alexandre Lacoste

In this study, a scalable online kernel learning framework is proposed for estimating bidirectional causal effects in systems characterized by mutual dependence and heteroskedasticity. Traditional causal inference often focuses on…

Machine Learning · Statistics 2025-11-24 Masahiro Tanaka

In the deep metric learning approach to image segmentation, a convolutional net densely generates feature vectors at the pixels of an image. Pairs of feature vectors are trained to be similar or different, depending on whether the…

Computer Vision and Pattern Recognition · Computer Science 2019-02-04 Kyle Luther , H. Sebastian Seung

Discovering interaction effects on a response of interest is a fundamental problem faced in biology, medicine, economics, and many other scientific disciplines. In theory, Bayesian methods for discovering pairwise interactions enjoy many…

Computation · Statistics 2022-11-15 Raj Agrawal , Jonathan H. Huggins , Brian Trippe , Tamara Broderick

We introduce and study methods for inferring and learning from correspondences among neurons. The approach enables alignment of data from distinct multiunit studies of nervous systems. We show that the methods for inferring correspondences…

Neurons and Cognition · Quantitative Biology 2015-01-28 Ashish Kapoor , E. Paxon Frady , Stefanie Jegelka , William B. Kristan , Eric Horvitz
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