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Dispersal is essential to the plethora of motile microorganisms living in porous environments, yet how it relates to movement patterns and pore space structure remains largely unknown. Here we investigate numerically the long-time dispersal…

Soft Condensed Matter · Physics 2025-03-06 T. Pietrangeli , R. Foffi , R. Stocker , C. Ybert , C. Cottin-Bizonne , F. Detcheverry

A statistical description of heavy particles suspended in incompressible rough self-similar flows is developed. It is shown that, differently from smooth flows, particles do not form fractal clusters. They rather distribute inhomogeneously…

Chaotic Dynamics · Physics 2007-05-23 J. Bec , M. Cencini , R. Hillerbrand

We consider a system of interacting diffusions labeled by a geographic space that is given by the hierarchical group $\Omega_N$ of order $N\in\mathbb{N}$. Individuals live in colonies and are subject to resampling and migration as long as…

Probability · Mathematics 2021-10-07 Andreas Greven , Frank den Hollander , Margriet Oomen

Scalar mixing fronts develop at the interface of agitated fluids of different solute concentrations. In such fronts, scalar fluctuations form at both microscopic and macroscopic scales, due to stretching-enhanced molecular diffusion and…

Fluid Dynamics · Physics 2026-05-18 Heyman Joris , Le Borgne Tanguy , Lester Daniel

We propose a minimal off-lattice model of living organisms where just a very few dynamical rules of growth are assumed. The stable coexistence of many clusters is detected when we replace the global restriction rule by a locally applied…

Physics and Society · Physics 2021-08-19 B. F. de Oliveira , M. V. de Moraes , D. Bazeia , A. Szolnoki

Environmental science almost invariably proposes problems of extreme complexity, typically characterized by strongly nonlinear evolution dynamics. The systems under investigation have many degrees of freedom - which makes them complicated -…

Atmospheric and Oceanic Physics · Physics 2007-05-23 A. Speranza , V. Lucarini

An organism that is newly introduced into an existing population has a survival probability that is dependent on both the population density of its environment and the competition it experiences with the members of that population.…

Populations and Evolution · Quantitative Biology 2024-12-17 Jason M. Gray , Rowan J. Barker-Clarke , Jacob G. Scott , Michael Hinczewski

We consider a time-continuous branching random walk on a one-dimensional lattice on which there is one center (lattice point) of particle generation, called branching source. The generation of particles in the branching source is described…

Probability · Mathematics 2023-12-19 E. Filichkina , E. Yarovaya

We study colonies of non-motile, rod-shaped bacteria growing on solid substrates. In our model, bacteria interact purely mechanically, by pushing each other away as they grow, and consume a diffusing nutrient. We show that mechanical…

Biological Physics · Physics 2015-06-15 F. D. C. Farrell , O. Hallatschek , D. Marenduzzo , B. Waclaw

A model of population growth and dispersal is considered where the spatial habitat is a lattice and reproduction occurs generationally. The resulting discrete dynamical systems exhibits velocity locking, where rational speed invasion fronts…

Dynamical Systems · Mathematics 2021-12-22 Matt Holzer , Zachary Richey , Wyatt Rush , Samuel Schmidgall

Marine plankton play a crucial role in carbon storage, oxygen production, global climate, and ecosystem function. Planktonic ecosystems are embedded in a Lagrangian patches of water that are continuously moving, stretching, and diluting.…

Populations and Evolution · Quantitative Biology 2023-01-30 Enrico Ser-Giacomi , Ricardo Martinez-Garcia , Stephanie Dutkiewicz , Michael J. Follows

The abundance of a species' population in an ecosystem is rarely stationary, often exhibiting large fluctuations over time. Using historical data on marine species, we show that the year-to-year fluctuations of population growth rate obey a…

Adaptation and Self-Organizing Systems · Physics 2015-06-02 Jie Sun , Sean P. Cornelius , John Janssen , Kimberly A. Gray , Adilson E. Motter

While many organisms filter feed and exchange heat or nutrients in flow, few benthic organisms also actively pulse to enhance feeding and exchange. One example is the pulsing soft coral (Heteroxenia fuscescens). Pulsing corals live in…

Quantitative Methods · Quantitative Biology 2018-09-19 Nicholas A. Battista , Julia E. Samson , Shilpa Khatri , Laura A. Miller

In marine plankton, many swimming species can perceive their environment with flow sensors. Can they use this flow information to travel faster in turbulence? To address this question, we consider plankters swimming at constant speed, whose…

Fluid Dynamics · Physics 2022-08-12 Rémi Monthiller , Aurore Loisy , Mimi A. R. Koehl , Benjamin Favier , Christophe Eloy

The "squirmer model" is a classical hydrodynamic model for the motion of interfacially-driven microswimmers, such as self-phoretic colloids or volvocine green algae. To date, most studies using the squirmer model have considered spherical…

Soft Condensed Matter · Physics 2023-10-31 Ruben Poehnl , William E. Uspal

Both community ecology and conservation biology seek further understanding of factors governing the advance of an invasive species. We model biological invasion as an individual-based, stochastic process on a two-dimensional landscape. An…

Populations and Evolution · Quantitative Biology 2010-07-12 Lauren O'Malley , G. Korniss , Thomas Caraco

A subcritical pattern-forming system with nonlinear advection in a bounded domain is recast as a slow-fast system in space and studied using a combination of geometric singular perturbation theory and numerical continuation. Two types of…

Pattern Formation and Solitons · Physics 2018-03-20 Daniele Avitabile , Mathieu Desroches , Edgar Knobloch , Martin Krupa

Bacterial swarming is a rapid mass-migration, in which thousands of cells spread collectively to colonize a surface. Physically, swarming is a natural example of active particles that use energy to generate motion. Accordingly,…

Soft Condensed Matter · Physics 2019-11-14 Avraham Be`er , Bella Ilkanaiv , Renan Gross , Daniel B. Kearns , Sebastian Heidenreich , Markus Bär , Gil Ariel

The ecological invasion problem in which a weaker exotic species invades an ecosystem inhabited by two strongly competing native species is modelled by a three-species competition-diffusion system. It is known that for a certain range of…

Populations and Evolution · Quantitative Biology 2018-11-01 Lorenzo Contento , Masayasu Mimura

Natural microbial populations often have complex spatial structures. This can impact their evolution, in particular the ability of mutants to take over. While mutant fixation probabilities are known to be unaffected by sufficiently…

Populations and Evolution · Quantitative Biology 2024-12-30 Alia Abbara , Anne-Florence Bitbol