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We introduce a dynamical spatio-temporal model formalized as a recurrent neural network for forecasting time series of spatial processes, i.e. series of observations sharing temporal and spatial dependencies. The model learns these…

Machine Learning · Computer Science 2018-04-24 Ali Ziat , Edouard Delasalles , Ludovic Denoyer , Patrick Gallinari

We identify a mechanism for biological spatial pattern formation arising when the signals that mediate interactions between individuals in a population have pulsed character. Our general population-signal framework shows that while for a…

Populations and Evolution · Quantitative Biology 2023-08-15 Eduardo H. Colombo , Cristóbal López , Emilio Hernández-García

We studied the effect of nearest pattern interaction on a globally pattern formation in a 2-dimensional space, where patterns are to grow initially from a noise in the presence of periodic supply of energy. Although our approach is general,…

Pattern Formation and Solitons · Physics 2009-10-31 Seong-Ok Jeong , Hie-Tae Moon , Tae-Wook Ko

We study time-periodic forcing of spatially-extended patterns near a Turing-Hopf bifurcation point. A symmetry-based normal form analysis yields several predictions, including that (i) weak forcing near the intrinsic Hopf frequency enhances…

Pattern Formation and Solitons · Physics 2015-05-13 C. M. Topaz , Anne J. Catlla

We study model spaces, in the sense of Hairer, for stochastic partial differential equations involving the fractional Laplacian. We prove that the fractional Laplacian is a singular kernel suitable to apply the theory of regularity…

Probability · Mathematics 2017-07-03 Nils Berglund , Christian Kuehn

It is well-established that including spatial structure and stochastic noise in models for predator-prey interactions invalidates the classical deterministic Lotka-Volterra picture of neutral population cycles. In contrast, stochastic…

Populations and Evolution · Quantitative Biology 2011-09-20 Uwe C. Tauber

Pattern formation often occurs in spatially extended physical, biological and chemical systems due to an instability of the homogeneous steady state. The type of the instability usually prescribes the resulting spatio-temporal patterns and…

Pattern Formation and Solitons · Physics 2015-04-14 David Schueler , Sergio Alonso , Alessandro Torcini , Markus Baer

We review the mathematical formalism underlying the modelling of stochasticity in biological systems. Beginning with a description of the system in terms of its basic constituents, we derive the mesoscopic equations governing the dynamics…

Populations and Evolution · Quantitative Biology 2012-11-05 Alan J. McKane , Tommaso Biancalani , Tim Rogers

A subcritical pattern-forming system with nonlinear advection in a bounded domain is recast as a slow-fast system in space and studied using a combination of geometric singular perturbation theory and numerical continuation. Two types of…

Pattern Formation and Solitons · Physics 2018-03-20 Daniele Avitabile , Mathieu Desroches , Edgar Knobloch , Martin Krupa

In this work, we introduce two spatio-temporal colored bounded noises, based on the zero-dimensional Cai-Lin and Tsallis-Borland noises. We then study and characterize the dependence of the defined bounded noises on both a temporal…

Statistical Mechanics · Physics 2015-03-20 Sebastiano de Franciscis , Alberto d'Onofrio

Spatial pattern formation is a key feature of many natural systems in physics, chemistry and biology. The essential theoretical issue in understanding pattern formation is to explain how a spatially homogeneous initial state can undergo…

Pattern Formation and Solitons · Physics 2015-06-04 Timothy Killingback , Gregory Loftus , Bala Sundaram

We consider the pattern formation problem in coupled identical systems after the global synchronized state becomes unstable. Based on analytical results relating the coupling strengths and the instability of each spatial mode (pattern) we…

Pattern Formation and Solitons · Physics 2009-11-10 Govindan Rangarajan , Yonghong Chen , Mingzhou Ding

A non-Markovian stochastic predator-prey model is introduced in which the prey are immobile plants and predators are diffusing herbivors. The model is studied by both mean-field approximation (MFA)and computer simulations. The MFA results a…

Disordered Systems and Neural Networks · Physics 2009-10-31 Rouzbeh Gerami , Mohammad R. Ejtehadi

This paper investigates the modeling of an important class of degradation data, which are collected from a spatial domain over time; for example, the surface quality degradation. Like many existing time-dependent stochastic degradation…

Methodology · Statistics 2017-12-29 Xiao Liu , Kyongmin Yeo , Jayant Kalagnanam

We study the spatial patterns formed by a system of interacting particles where the mobility of any individual is determined by the population crowding at two different spatial scales. In this way we model the behavior of some biological…

Statistical Mechanics · Physics 2015-07-08 Ricardo Martínez-García , Clara Murgui , Emilio Hernández-García , Cristóbal López

Imaging is an important means by which information is gathered regarding the physical world. Spatial resolution and signal-to-noise ratio are underpinning concepts. There is a paucity of rigorous definitions for these quantities, which are…

Optics · Physics 2019-09-27 David M. Paganin , Alexander Kozlov , Timur E. Gureyev

Cannibalism, which is the act of killing and at least partial consumption of conspecifics, is ubiquitous in nature. Mathematical models have considered cannibalism in the predator primarily, and show that predator cannibalism in two species…

Populations and Evolution · Quantitative Biology 2015-10-13 Aladeen Basheer , Emmanuel Quansah , Schuman Bhowmick , Rana D. Parshad

We present a general theoretical model for the spatio-temporal dynamics of animal contests. Inspired by interactions between physical particles, the model is formulated in terms of effective interaction potentials, which map typical…

Biological Physics · Physics 2022-12-01 Amir Haluts , Alex Jordan , Nir S. Gov

The ecological invasion problem in which a weaker exotic species invades an ecosystem inhabited by two strongly competing native species is modelled by a three-species competition-diffusion system. It is known that for a certain range of…

Populations and Evolution · Quantitative Biology 2018-11-01 Lorenzo Contento , Masayasu Mimura

Eco-evolutionary frameworks can explain certain features of communities in which ecological and evolutionary processes occur over comparable timescales. Here, we investigate whether an evolutionary dynamics may interact with the spatial…

Populations and Evolution · Quantitative Biology 2019-12-04 Eduardo H. Colombo , Ricardo Martínez-García , Cristóbal , López , Emilio Hernández-García
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