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Related papers: Network growth approach to macroevolution

200 papers

One of the aims of systems biology is to build multiple layered and multiple scale models of living systems which can efficiently describe phenomena occurring at various level of resolution. Such models should consist of layers of various…

Dynamical Systems · Mathematics 2015-03-03 Jacek Banasiak , Aleksandra Falkiewicz , Proscovia Namayanja

The stability of ecosystems as well as the relation between topology and dynamics on multilayer networks are important questions that are usually discussed in separate communities. Here, we combine these two topics by investigating the…

Populations and Evolution · Quantitative Biology 2015-07-24 Jonas Richhardt , Sebastian Plitzko , Florian Schwarzmüller , Barbara Drossel

Competitive birth-death processes often exhibit an oscillatory behavior. We investigate a particular case where the oscillation cycles are marginally stable on the mean-field level. An iconic example of such a system is the Lotka-Volterra…

Populations and Evolution · Quantitative Biology 2015-05-13 Matthew Parker , Alex Kamenev

How self-organized networks develop, mature and degenerate is a key question for sociotechnical, cyberphysical and biological systems with potential applications from tackling violent extremism through to neurological diseases. So far, it…

Physics and Society · Physics 2017-06-05 M. Zheng , Z. Cao , Y. Vorobyeva , P. Manrique , C. Song , N. F. Johnson

Inspired by language competition processes, we present a model of coupled evolution of node and link states. In particular, we focus on the interplay between the use of a language and the preference or attitude of the speakers towards it,…

Physics and Society · Physics 2016-12-05 Adrián Carro , Raúl Toral , Maxi San Miguel

As one of the main subjects of investigation in data science, network science has been demonstrated a wide range of applications to real-world networks analysis and modeling. For example, the pervasive presence of structural or topological…

Logic in Computer Science · Computer Science 2020-09-28 Felipe S. Abrahão , Klaus Wehmuth , Artur Ziviani

Two mathematical models of macroevolution are studied. These models have population dynamics at the species level, and mutations and extinction of species are also included. The population dynamics are updated by difference equations with…

Populations and Evolution · Quantitative Biology 2014-04-16 Yohsuke Murase , Takashi Shimada , Nobuyasu Ito , Per Arne Rikvold

A detailed analysis of three species-rich ecosystem food webs has shown that they display scale-free distributions of connections. Such graphs of interaction are in fact shared by a number of biological and technological networks, which…

Disordered Systems and Neural Networks · Physics 2007-05-23 Ricard V. Sole Jose M. Montoya

This paper investigates the competition of two species in a heterogeneous environment subject to the effect of harvesting. The most realistic harvesting case is connected with the intrinsic growth rate, and the harvesting functions are…

Microscopic strategy update rules play an important role in the evolutionary dynamics of cooperation among interacting agents on complex networks. Many previous related works only consider one \emph{fixed} rule, while in the real world,…

Optimization and Control · Mathematics 2023-11-27 Shengxian Wang , Weijia Yao , Ming Cao , Xiaojie Chen

Complex network theory provides a unifying framework for the study of structured dynamic systems. The current literature emphasizes a widely reported phenomenon of intermittent interaction among network vertices. In this paper, we introduce…

Social and Information Networks · Computer Science 2025-02-17 Ziyan Zeng , Minyu Feng , Pengfei Liu , Jurgen Kurths

The construction of a network of cell-to-cell contacts makes it possible to characterize the patterns and spatial organisation of tissues. Such networks are highly dynamic, depending on the changes of the tissue architecture caused by cell…

Tissues and Organs · Quantitative Biology 2013-06-25 Attila Csikász-Nagy , Luis M. Escudero , Martial Guillaud , Sean Sedwards , Buzz Baum , Matteo Cavaliere

Many theoretical models have been formulated to better understand the coevolutionary patterns that emerge from antagonistic interactions. These models usually assume that the attacks by the exploiters are random, so the effect of victim…

Evolutionary dynamics can be studied in well-mixed or structured populations. Population structure typically arises from the heterogeneous distribution of individuals in physical space or on social networks. Here we introduce a new type of…

Populations and Evolution · Quantitative Biology 2009-06-04 Tibor Antal , Hisashi Ohtsuki , John Wakeley , Peter D. Taylor , Martin A. Nowak

Complex networks often exhibit co-evolutionary dynamics, meaning that the network topology and the state of nodes or links are coupled, affecting each other in overlapping time scales. We focus on the co-evolutionary dynamics of online…

Social and Information Networks · Computer Science 2015-08-24 Demetris Antoniades , Constantine Dovrolis

Many complex systems can be described in terms of networks of interacting units. Recent studies have shown that a wide class of both natural and artificial nets display a surprisingly widespread feature: the presence of highly heterogeneous…

Disordered Systems and Neural Networks · Physics 2007-05-23 R. Ferrer i Cancho , R. V. Sole

The ever-increasing knowledge of the structure of various real-world networks has uncovered their complex multi-mechanism-governed evolution processes. Therefore, a better understanding of the structure and evolution of these networked…

Physics and Society · Physics 2007-05-23 Ke Deng , Heping Zhao , Dejun Li

We analyze a model of interacting agents (e.g. prebiotic chemical species) which are represended by nodes of a network, whereas their interactions are mapped onto directed links between these nodes. On a fast time scale, each agent follows…

Populations and Evolution · Quantitative Biology 2009-11-13 Adrian M. Seufert , Frank Schweitzer

Evolutionary game theory is one of the key paradigms behind many scientific disciplines from science to engineering. Previous studies proposed a strategy updating mechanism, which successfully demonstrated that the scale-free network can…

Physics and Society · Physics 2015-06-19 Yichao Zhang , M. A. Aziz-Alaoui , Cyrille Bertelle , Shi Zhou , Wenting Wang

We discuss a model for evolutionary game dynamics in a growing, network-structured population. In our model, new players can either make connections to random preexisting players or preferentially attach to those that have been successful…

Physics and Society · Physics 2015-05-13 J. Poncela , J. Gomez-Gardenes , A. Traulsen , Y. Moreno