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Related papers: Collective evolution and the genetic code

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The post-genomic era has brought opportunities to bridge traditionally separate fields of early history of life and brought new insight into origin and evolution of biodiversity. According to distributions of codons in genome sequences, I…

Other Quantitative Biology · Quantitative Biology 2018-07-13 Dirson Jian Li

How cooperation emerges in human societies is both an evolutionary enigma, and a practical problem with tangible implications for societal health. Population structure has long been recognized as a catalyst for cooperation because local…

Populations and Evolution · Quantitative Biology 2022-01-06 Qi Su , Joshua. B Plotkin

A simple model of species origin resulted from dynamic features of a population, solely, is developed. The model is based on the evolution optimality in space distribution, and the selection is gone over the mobility. Some biological issues…

Populations and Evolution · Quantitative Biology 2008-04-25 Michael G. Sadovsky

The speed and transformative power of human cultural evolution is evident from the change it has wrought on our planet. This chapter proposes a human computation program aimed at (1) distinguishing algorithmic from non-algorithmic…

Multiagent Systems · Computer Science 2013-10-24 Liane Gabora

The continuous interest in the social network area contributes to the fast development of this field. The new possibilities of obtaining and storing data facilitate deeper analysis of the entire social network, extracted social groups and…

Social and Information Networks · Computer Science 2017-01-18 Stanisław Saganowski , Piotr Bródka , Przemysław Kazienko

The origin of diversification and coexistence of genes and species have been traditionally studied in isolated biological levels. Ecological and evolutionary views have focused on the mechanisms that enable or constrain species coexistence,…

Populations and Evolution · Quantitative Biology 2008-07-18 Carlos J. Melian , David Alonso , Diego P. Vazquez , James Regetz

The selection pressures that have shaped the evolution of complex traits in humans remain largely unknown, and in some contexts highly contentious, perhaps above all where they concern mean trait differences among groups. To date, the…

Populations and Evolution · Quantitative Biology 2020-10-08 Arbel Harpak , Molly Przeworski

Natural selection explains how life has evolved over millions of years from more primitive forms. The speed at which this happens, however, has sometimes defied formal explanations when based on random (uniformly distributed) mutations.…

Neural and Evolutionary Computing · Computer Science 2018-06-22 Santiago Hernández-Orozco , Narsis A. Kiani , Hector Zenil

A hypothesis of the evolution of the genetic code is proposed, the leading mechanism of which is the nucleotide spontaneous damage leading to AT-enrichment of the genome. The hypothesis accounts for stability of the genetic code towards…

Populations and Evolution · Quantitative Biology 2007-10-03 Denis A. Semenov

We investigate the ability of a genetic algorithm to design cellular automata that perform computations. The computational strategies of the resulting cellular automata can be understood using a framework in which ``particles'' embedded in…

adap-org · Physics 2015-06-30 James P. Crutchfield , Melanie Mitchell , Rajarshi Das

Without contributing, defectors take more benefit from social resources than cooperators which is the reflection of a specific character of individuals. However, natural physical mechanisms of our society promote cooperation. Thus, in the…

Populations and Evolution · Quantitative Biology 2021-09-16 Bijan Sarkar

Cooperation is a persistent behavioral pattern of entities pooling and sharing resources. Its ubiquity in nature poses a conundrum. Whenever two entities cooperate, one must willingly relinquish something of value to the other. Why is this…

Adaptation and Self-Organizing Systems · Physics 2022-05-24 Ole Peters , Alexander Adamou

The current theory of evolution is almost the one Darwin and Wallace proposed two centuries ago and the following discoveries e.g., Mendelian genetics and neutral mutation theory have not made significant modifications. The current…

Populations and Evolution · Quantitative Biology 2023-09-14 Reza Rahmanzadeh

Existing theoretical models of evolution focus on the relative fitness advantages of different mutants in a population while the dynamic behavior of the population size is mostly left unconsidered. We here present a generic stochastic model…

Populations and Evolution · Quantitative Biology 2010-10-20 Anna Melbinger , Jonas Cremer , Erwin Frey

Collective sensing is an emergent phenomenon which enables individuals to estimate a hidden property of the environment through the observation of social interactions. Previous work on collective sensing shows that gregarious individuals…

Populations and Evolution · Quantitative Biology 2018-05-24 Stefano Bennati

Recent studies of in vitro evolution of DNA via protein binding indicate that the evolution behavior is qualitatively different in different parameter regimes. I here present a general theory that is valid for a wide range of parameters,…

Populations and Evolution · Quantitative Biology 2009-11-10 Morten Kloster

Groups - social communities are important components of entire societies, analysed by means of the social network concept. Their immanent feature is continuous evolution over time. If we know how groups in the social network has evolved we…

Social and Information Networks · Computer Science 2012-10-19 Piotr Bródka , Przemysław Kazienko , Bartosz Kołoszczyk

A central biological question is how natural organisms are so evolvable (capable of quickly adapting to new environments). A key driver of evolvability is the widespread modularity of biological networks--their organization as functional,…

Populations and Evolution · Quantitative Biology 2015-03-13 Jeff Clune , Jean-Baptiste Mouret , Hod Lipson

The origin of cellular life can be described in terms of the transition from inorganic matter: solids, liquids and gases, to the emergence of cooperative assemblies of organic matter, DNA and proteins,capable of replication and metabolism.…

Populations and Evolution · Quantitative Biology 2023-05-01 Lloyd Demetrius

Social structure affects the emergence and maintenance of cooperation. Here we study the evolutionary dynamics of cooperation in fragmented societies, and show that conjoining segregated cooperation-inhibiting groups, if done properly,…

Social and Information Networks · Computer Science 2018-07-27 Babak Fotouhi , Naghmeh Momeni , Benjamin Allen , Martin A. Nowak