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An efficient technique is introduced for model inference of complex nonlinear dynamical systems driven by noise. The technique does not require extensive global optimization, provides optimal compensation for noise-induced errors and is…

Data Analysis, Statistics and Probability · Physics 2007-05-23 V. N. Smelyanskiy , D. A. Timucin , A. Bandrivskyy , D. G. Luchinsky

Many complex engineering systems consist of multiple subsystems that are developed by different teams of engineers. To analyse, simulate and control such complex systems, accurate yet computationally efficient models are required. Modular…

Systems and Control · Electrical Eng. & Systems 2023-01-02 Lars A. L. Janssen , Bart Besselink , Rob H. B. Fey , Nathan van de Wouw

This paper presents a non-minimal order dynamics model for many analysis, simulation, and control problems of constrained mechanical systems with switching topology by making use of linear projection operator. The distinct features of this…

Systems and Control · Electrical Eng. & Systems 2021-08-24 Farhad Aghili

Constructing gene regulatory networks is a fundamental task in systems biology. We introduce a Gaussian reciprocal graphical model for inference about gene regulatory relationships by integrating mRNA gene expression and DNA level…

Methodology · Statistics 2016-07-26 Yang Ni , Yuan Ji , Peter Mueller

Dynamic gene-regulatory networks are complex since the number of potential components involved in the system is very large. Estimating dynamic networks is an important task because they compromise valuable information about interactions…

Methodology · Statistics 2012-05-15 Antonino Abbruzzo , Ernst Wit

In the last chapter of his book "The Algebraic Theory of Modular Systems " published in 1916, F. S. Macaulay developped specific techniques for dealing with " unmixed polynomial ideals " by introducing what he called " inverse systems ".…

Analysis of PDEs · Mathematics 2012-12-21 Jean-François Pommaret

The unknown inputs in a dynamical system may represent unknown external drivers, input uncertainty, state uncertainty, or instrument faults and thus unknown-input reconstruction has several wide-spread applications. In this paper we…

Optimization and Control · Mathematics 2015-09-22 Roshan A Chavan , Harish J. Palanthandalam-Madapusi

Reversibility is a key concept in Markov models and Master-equation models of molecular kinetics. The analysis and interpretation of the transition matrix encoding the kinetic properties of the model relies heavily on the reversibility…

Chemical Physics · Physics 2015-09-23 Benjamin Trendelkamp-Schroer , Hao Wu , Fabian Paul , Frank Noé

This paper deals with the computation of polytopic invariant sets for polynomial dynamical systems. An invariant set of a dynamical system is a subset of the state space such that if the state of the system belongs to the set at a given…

Optimization and Control · Mathematics 2015-03-17 Mohamed Amin Ben Sassi , Antoine Girard

We address the inverse problem of reconstructing both the structure and dynamics of a network from mean-field measurements, which are linear combinations of node states. This setting arises in applications where only a few aggregated…

Dynamical Systems · Mathematics 2025-11-04 Narcicegi Kiran , Tiago Pereira

A novel wide-area control design is presented to mitigate inter-area power frequency oscillations. A large-scale power system is decomposed into a network of passivity-short subsystems whose nonlinear interconnections have a state-dependent…

Systems and Control · Electrical Eng. & Systems 2021-01-21 Ying Xu , Zhihua Qu , Roland Harvey , Toru Namerikawa

We show that weakly reversible mass-action systems can have a continuum of positive steady states, coming from the zeroes of a multivariate polynomial. Moreover, the same is true of systems whose underlying reaction network is reversible…

Molecular Networks · Quantitative Biology 2022-09-14 Balázs Boros , Gheorghe Craciun , Polly Y. Yu

We introduce a reverse engineering approach to drive a RC circuit. This technique is implemented experimentally 1) to reach a stationary regime associated to a sinusoidal driving in very short amount of time, 2) to ensure a fast discharge…

Classical Physics · Physics 2019-01-21 S. Faure , S. Ciliberto , E. Trizac , D. Guéry-Odelin

Inverse design enables automating the discovery and optimization of devices achieving performance significantly exceeding that of traditional human-engineered designs. However, existing methodologies to inverse-design electromagnetic…

Computational Physics · Physics 2026-01-30 Jui-Hung Sun , Mohamed Elsawaf , Yifei Zheng , Ho-Chun Lin , Chia Wei Hsu , Constantine Sideris

Input-affine dynamical systems often arise in control and modeling scenarios, such as the data-driven case when state-derivative observations are recorded under bounded noise. Common tasks in system analysis and control include optimal…

Optimization and Control · Mathematics 2024-02-21 Jared Miller , Mario Sznaier

Multidisciplinary design optimization methods aim at adapting numerical optimization techniques to the design of engineering systems involving multiple disciplines. In this context, a large number of mixed continuous, integer and…

We develop a technique for the multivariate data analysis of perturbed self-sustained oscillators. The approach is based on the reconstruction of the phase dynamics model from observations and on a subsequent exploration of this model. For…

Medical Physics · Physics 2019-06-03 M. Rosenblum , M. Frühwirth , M. Moser , A. Pikovsky

Many discrete models of biological networks rely exclusively on Boolean variables and many tools and theorems are available for analysis of strictly Boolean models. However, multilevel variables are often required to account for threshold…

Molecular Networks · Quantitative Biology 2017-05-09 Adrien Fauré , Shizuo Kaji

We propose a new LMI approach to the design of optimal switching sequences for polynomial dynamical systems with state constraints. We formulate the switching design problem as an optimal control problem which is then relaxed to a linear…

Optimization and Control · Mathematics 2013-03-11 Didier Henrion , Jamal Daafouz , Mathieu Claeys

We introduce a computationally efficient method for the automation of inverse design in science and engineering. Based on simple least-square regression, the underlying dynamic mode decomposition algorithm can be used to construct a…

Machine Learning · Computer Science 2025-02-14 Yunpeng Zhu , Liangliang Cheng , Anping Jing , Hanyu Huo , Ziqiang Lang , Bo Zhang , J. Nathan Kutz